Top 10 genes with highest correlation to Rv0971c/echA7:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1020/mfd | (cc=0.6365) | info on Rv1020/mfd |
| Rv0844c/narL | (cc=0.618) | info on Rv0844c/narL |
| Rv3210c/- | (cc=0.5775) | info on Rv3210c/- |
| Rv2545/vapB18 | (cc=0.5649) | info on Rv2545/vapB18 |
| Rv1787/PPE25 | (cc=0.5609) | info on Rv1787/PPE25 |
| Rv1051c/- | (cc=0.5574) | info on Rv1051c/- |
| Rv2161c/- | (cc=0.5443) | info on Rv2161c/- |
| Rv0742/PE_PGRS8 | (cc=0.5395) | info on Rv0742/PE_PGRS8 |
| Rv1994c/cmtR | (cc=0.5331) | info on Rv1994c/cmtR |
| Rv0222/echA1 | (cc=0.5292) | info on Rv0222/echA1 |
Correlation of Rv0971c/echA7 with Rv3210c/-
Normalized LFCs for Rv0971c/echA7:
(description and provenance of datasets)
| Rv0971c/echA7 | Rv3210c/- | |
| Fe_supp_jason_reseq | -0.535 | 2.062 |
| low_pH_jason_reseq | -1.877 | -3.853 |
| NO_jason_reseq | 0.297 | -2.056 |
| B6_jason_reseq | -2.077 | -1.674 |
| MHCII_jason_reseq | -1.582 | -2.452 |
| Isoniazid02 | 0.243 | -0.351 |
| Rifampicin4 | 1.308 | -0.311 |
| Ethambutol3 | 1.133 | 0.0 |
| Meropenem3 | 0.879 | 0.0 |
| Vancomycin16 | 0.117 | -0.305 |
| Rv2680_day32 | -0.022 | 0.617 |
| H37Rv_KO_MarP | 0.378 | -3.844 |
| hypoxia_3wks | -0.694 | -5.383 |
| hypoxia_6wks | -0.867 | -2.533 |
| glycerol | 1.375 | -0.709 |
| cholesterol | 0.372 | -0.509 |
| AJ | 0.299 | -0.18 |
| Bibs02 | 0.29 | 0.132 |
| Bibs02c | -0.186 | -0.336 |
| BL6 | 1.067 | 2.786 |
| BL6a | 1.085 | 3.965 |
| BXD01 | 0.483 | 4.097 |
| BXD010 | 1.122 | 4.494 |
| BXD011 | 0.698 | 4.043 |
| BXD03 | 1.026 | 2.532 |
| BXD04 | 0.531 | 4.283 |
| BXD05 | 1.583 | 3.297 |
| BXD06 | 0.447 | 4.797 |
| BXD07 | 1.171 | 4.33 |
| BXD08 | 1.757 | 4.103 |
| BXD09 | 1.271 | 4.378 |
| CAST | 0.561 | -0.809 |
| CCcont | 1.056 | 4.389 |
| DS01 | 0.34 | 0.0 |
| DS02 | 0.934 | -0.548 |
| DS04 | 2.478 | 1.97 |
| DS0c | -0.591 | -0.168 |
| GP01 | 0.185 | -0.077 |
| GP02 | 1.92 | 0.116 |
| GP0c | 2.155 | 1.73 |
| NOD | -0.875 | -0.789 |
| NZO | -0.932 | -0.701 |
| PWK | 0.53 | -0.689 |
| H37Rv_KO_CtpC | 1.818 | 1.944 |
| H37Rv_KO_CtpD | 2.045 | 1.545 |
| H37Rv_KO_Rv1272 | 1.674 | 2.512 |
| H37Rv_KO_SugABC | 2.493 | 3.415 |
| H37Rv_KO_MbtN | 0.871 | 5.206 |
| Trans05 | 1.229 | 3.053 |
| macrophage_unactivated | 0.641 | -0.716 |
| IL1 | 0.982 | 0.341 |
| Rapamycin | 1.169 | 0.0 |
| Tcell | -0.179 | -1.619 |
| GMCSF | 0.298 | 0.721 |
| IFNab | 0.707 | 2.283 |
| IFNg | 0.166 | 1.109 |
| IFNg_GMCSF1 | 0.71 | -0.396 |
| Rv1432_day32 | 0.595 | -1.71 |
| Rv1565c_day32 | -0.847 | -3.884 |
| secA2_input | 0.92 | 1.565 |
| delta_Rv3594 | -0.902 | 0.153 |
| delta_Rv3717 | -0.526 | 0.946 |
| delta_Rv3811 | -0.815 | 0.913 |
| delta_Rv0954 | -0.508 | -3.66 |
| PonA1 | -1.144 | -5.488 |
| EccD1_KO | 0.0 | -2.457 |
| EspI_KO | 1.298 | -2.073 |
| PE35_KO | -0.044 | -3.104 |
| PPE68_KO | -1.638 | -3.161 |
| glycerol2 | 0.116 | 0.82 |
| lignocerate | 0.613 | 0.0 |
| oleate | -0.688 | 0.0 |
| phosphatidylcholine | 0.332 | 0.0 |
| acetate | 0.712 | 0.0 |
| glucAc | 0.885 | 0.392 |
| Rv0950ko | 0.476 | -0.214 |
| Rv1096ko | 1.158 | 0.178 |
| Rv3684ko | 1.867 | 0.635 |
| delta_otsA_trehalose | 0.768 | 0.0 |