Top 10 genes with highest correlation to Rv0968/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0342/iniA | (cc=0.6427) | info on Rv0342/iniA |
| Rv3472/- | (cc=0.6354) | info on Rv3472/- |
| Rv3312c/- | (cc=0.6277) | info on Rv3312c/- |
| Rv0399c/lpqK | (cc=0.6234) | info on Rv0399c/lpqK |
| Rv1997/ctpF | (cc=0.6072) | info on Rv1997/ctpF |
| Rv3566c/nat | (cc=0.6067) | info on Rv3566c/nat |
| Rv3447c/eccC4 | (cc=0.5768) | info on Rv3447c/eccC4 |
| Rv3162c/- | (cc=0.5573) | info on Rv3162c/- |
| Rv2313c/- | (cc=0.5542) | info on Rv2313c/- |
| Rv2679/echA15 | (cc=0.5541) | info on Rv2679/echA15 |
Correlation of Rv0968/- with Rv3472/-
Normalized LFCs for Rv0968/-:
(description and provenance of datasets)
| Rv0968/- | Rv3472/- | |
| Fe_supp_jason_reseq | 0.704 | -0.911 |
| low_pH_jason_reseq | -0.738 | -0.85 |
| NO_jason_reseq | 0.423 | 0.648 |
| B6_jason_reseq | 0.01 | -0.49 |
| MHCII_jason_reseq | 0.27 | 0.305 |
| Isoniazid02 | -3.296 | -2.99 |
| Rifampicin4 | 0.831 | 0.912 |
| Ethambutol3 | -2.914 | -2.932 |
| Meropenem3 | -3.018 | -2.462 |
| Vancomycin16 | -1.112 | -1.053 |
| Rv2680_day32 | 0.91 | 0.55 |
| H37Rv_KO_MarP | 0.883 | 0.975 |
| hypoxia_3wks | -0.203 | -0.945 |
| hypoxia_6wks | -1.349 | -0.443 |
| glycerol | 0.677 | -0.025 |
| cholesterol | 0.845 | 0.256 |
| AJ | 0.528 | -0.234 |
| Bibs02 | -0.278 | -0.648 |
| Bibs02c | 0.671 | -1.084 |
| BL6 | -0.789 | -1.53 |
| BL6a | -0.393 | -0.702 |
| BXD01 | -0.379 | 0.203 |
| BXD010 | -0.019 | -1.841 |
| BXD011 | -0.923 | -1.331 |
| BXD03 | -0.794 | -1.88 |
| BXD04 | -0.426 | -1.214 |
| BXD05 | 0.48 | -1.129 |
| BXD06 | -0.954 | -1.016 |
| BXD07 | -0.699 | -0.954 |
| BXD08 | -0.379 | -1.976 |
| BXD09 | -0.542 | -1.296 |
| CAST | 0.265 | -1.061 |
| CCcont | -0.929 | -1.77 |
| DS01 | -0.469 | -0.029 |
| DS02 | 0.635 | -1.126 |
| DS04 | 0.093 | 0.178 |
| DS0c | -0.211 | -0.493 |
| GP01 | 0.345 | 1.508 |
| GP02 | -0.744 | -0.448 |
| GP0c | -0.329 | 0.926 |
| NOD | 0.885 | -0.138 |
| NZO | -0.27 | -1.114 |
| PWK | -0.254 | 0.264 |
| H37Rv_KO_CtpC | -0.14 | -0.418 |
| H37Rv_KO_CtpD | 1.622 | -0.179 |
| H37Rv_KO_Rv1272 | 1.062 | -1.183 |
| H37Rv_KO_SugABC | 0.86 | 0.478 |
| H37Rv_KO_MbtN | -1.047 | -1.758 |
| Trans05 | -0.921 | -0.463 |
| macrophage_unactivated | -0.843 | 0.117 |
| IL1 | -0.946 | -3.553 |
| Rapamycin | -1.105 | -1.97 |
| Tcell | -0.472 | 0.0 |
| GMCSF | -0.055 | -1.402 |
| IFNab | -0.13 | -0.112 |
| IFNg | -0.516 | -0.885 |
| IFNg_GMCSF1 | -0.569 | -2.394 |
| Rv1432_day32 | -0.215 | -0.36 |
| Rv1565c_day32 | 0.445 | 0.028 |
| secA2_input | 1.842 | -0.027 |
| delta_Rv3594 | 0.096 | -0.864 |
| delta_Rv3717 | -0.593 | 0.283 |
| delta_Rv3811 | -0.167 | 0.256 |
| delta_Rv0954 | -0.105 | -0.616 |
| PonA1 | 1.324 | 1.502 |
| EccD1_KO | 1.237 | 0.793 |
| EspI_KO | -0.074 | -0.958 |
| PE35_KO | 0.111 | -0.055 |
| PPE68_KO | -0.192 | 0.061 |
| glycerol2 | 0.146 | -0.834 |
| lignocerate | 0.072 | -0.922 |
| oleate | 0.18 | 0.057 |
| phosphatidylcholine | 0.326 | -0.668 |
| acetate | 0.352 | -0.702 |
| glucAc | 0.061 | -1.387 |
| Rv0950ko | 0.458 | -0.443 |
| Rv1096ko | 1.2 | 1.321 |
| Rv3684ko | 0.652 | 0.0 |
| delta_otsA_trehalose | 1.843 | 0.029 |