Top 10 genes with highest correlation to Rv0968/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0342/iniA | (cc=0.6427) | info on Rv0342/iniA |
| Rv3472/- | (cc=0.6354) | info on Rv3472/- |
| Rv3312c/- | (cc=0.6277) | info on Rv3312c/- |
| Rv0399c/lpqK | (cc=0.6234) | info on Rv0399c/lpqK |
| Rv1997/ctpF | (cc=0.6072) | info on Rv1997/ctpF |
| Rv3566c/nat | (cc=0.6067) | info on Rv3566c/nat |
| Rv3447c/eccC4 | (cc=0.5768) | info on Rv3447c/eccC4 |
| Rv3162c/- | (cc=0.5573) | info on Rv3162c/- |
| Rv2313c/- | (cc=0.5542) | info on Rv2313c/- |
| Rv2679/echA15 | (cc=0.5541) | info on Rv2679/echA15 |
Correlation of Rv0968/- with Rv3447c/eccC4
Normalized LFCs for Rv0968/-:
(description and provenance of datasets)
| Rv0968/- | Rv3447c/eccC4 | |
| Fe_supp_jason_reseq | 0.704 | 0.377 |
| low_pH_jason_reseq | -0.738 | -0.102 |
| NO_jason_reseq | 0.423 | -0.215 |
| B6_jason_reseq | 0.01 | 0.128 |
| MHCII_jason_reseq | 0.27 | 0.166 |
| Isoniazid02 | -3.296 | -2.02 |
| Rifampicin4 | 0.831 | 0.133 |
| Ethambutol3 | -2.914 | -0.233 |
| Meropenem3 | -3.018 | -1.743 |
| Vancomycin16 | -1.112 | -0.841 |
| Rv2680_day32 | 0.91 | 0.24 |
| H37Rv_KO_MarP | 0.883 | 0.972 |
| hypoxia_3wks | -0.203 | 0.255 |
| hypoxia_6wks | -1.349 | 0.134 |
| glycerol | 0.677 | -0.399 |
| cholesterol | 0.845 | -0.108 |
| AJ | 0.528 | 0.264 |
| Bibs02 | -0.278 | 0.499 |
| Bibs02c | 0.671 | -0.414 |
| BL6 | -0.789 | -0.443 |
| BL6a | -0.393 | -0.839 |
| BXD01 | -0.379 | -0.356 |
| BXD010 | -0.019 | -1.181 |
| BXD011 | -0.923 | -0.908 |
| BXD03 | -0.794 | -0.623 |
| BXD04 | -0.426 | 0.28 |
| BXD05 | 0.48 | -0.346 |
| BXD06 | -0.954 | -0.718 |
| BXD07 | -0.699 | -0.378 |
| BXD08 | -0.379 | 0.151 |
| BXD09 | -0.542 | -1.141 |
| CAST | 0.265 | 0.287 |
| CCcont | -0.929 | -0.633 |
| DS01 | -0.469 | 0.164 |
| DS02 | 0.635 | -0.054 |
| DS04 | 0.093 | -0.623 |
| DS0c | -0.211 | 0.71 |
| GP01 | 0.345 | 0.374 |
| GP02 | -0.744 | 1.007 |
| GP0c | -0.329 | -0.257 |
| NOD | 0.885 | -0.226 |
| NZO | -0.27 | 0.117 |
| PWK | -0.254 | 0.023 |
| H37Rv_KO_CtpC | -0.14 | 0.019 |
| H37Rv_KO_CtpD | 1.622 | -0.111 |
| H37Rv_KO_Rv1272 | 1.062 | 0.19 |
| H37Rv_KO_SugABC | 0.86 | 0.415 |
| H37Rv_KO_MbtN | -1.047 | -0.051 |
| Trans05 | -0.921 | -0.221 |
| macrophage_unactivated | -0.843 | -0.619 |
| IL1 | -0.946 | -0.495 |
| Rapamycin | -1.105 | -0.601 |
| Tcell | -0.472 | -0.264 |
| GMCSF | -0.055 | 0.203 |
| IFNab | -0.13 | -0.686 |
| IFNg | -0.516 | -0.446 |
| IFNg_GMCSF1 | -0.569 | -0.082 |
| Rv1432_day32 | -0.215 | 0.223 |
| Rv1565c_day32 | 0.445 | 0.085 |
| secA2_input | 1.842 | 0.825 |
| delta_Rv3594 | 0.096 | -0.5 |
| delta_Rv3717 | -0.593 | -0.076 |
| delta_Rv3811 | -0.167 | 0.057 |
| delta_Rv0954 | -0.105 | 0.121 |
| PonA1 | 1.324 | -0.141 |
| EccD1_KO | 1.237 | -0.214 |
| EspI_KO | -0.074 | 0.456 |
| PE35_KO | 0.111 | 0.411 |
| PPE68_KO | -0.192 | 0.451 |
| glycerol2 | 0.146 | 0.538 |
| lignocerate | 0.072 | 0.421 |
| oleate | 0.18 | 0.35 |
| phosphatidylcholine | 0.326 | 0.346 |
| acetate | 0.352 | 0.12 |
| glucAc | 0.061 | 0.074 |
| Rv0950ko | 0.458 | -0.431 |
| Rv1096ko | 1.2 | 0.703 |
| Rv3684ko | 0.652 | 0.599 |
| delta_otsA_trehalose | 1.843 | 0.939 |