Top 10 genes with highest correlation to Rv0950c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3207c/- | (cc=0.6704) | info on Rv3207c/- |
| Rv1836c/- | (cc=0.6606) | info on Rv1836c/- |
| Rv2553c/- | (cc=0.6173) | info on Rv2553c/- |
| Rv2363/amiA2 | (cc=0.5803) | info on Rv2363/amiA2 |
| Rv2190c/- | (cc=0.5756) | info on Rv2190c/- |
| Rv3101c/ftsX | (cc=0.5694) | info on Rv3101c/ftsX |
| Rv1006/- | (cc=0.5395) | info on Rv1006/- |
| Rv3102c/ftsE | (cc=0.5186) | info on Rv3102c/ftsE |
| Rv1821/secA2 | (cc=0.5137) | info on Rv1821/secA2 |
| Rv0867c/rpfA | (cc=0.4933) | info on Rv0867c/rpfA |
Correlation of Rv0950c/- with Rv2363/amiA2
Normalized LFCs for Rv0950c/-:
(description and provenance of datasets)
| Rv0950c/- | Rv2363/amiA2 | |
| Fe_supp_jason_reseq | 2.366 | 2.878 |
| low_pH_jason_reseq | -3.244 | -0.634 |
| NO_jason_reseq | -1.62 | -0.633 |
| B6_jason_reseq | -0.757 | -0.421 |
| MHCII_jason_reseq | 0.645 | 1.355 |
| Isoniazid02 | -0.597 | -2.015 |
| Rifampicin4 | -1.522 | -5.334 |
| Ethambutol3 | 0.056 | 0.556 |
| Meropenem3 | -0.135 | -2.857 |
| Vancomycin16 | -1.807 | -3.892 |
| Rv2680_day32 | 0.511 | -0.89 |
| H37Rv_KO_MarP | -2.272 | -3.586 |
| hypoxia_3wks | -1.196 | -0.989 |
| hypoxia_6wks | -1.297 | -1.934 |
| glycerol | -1.374 | 1.138 |
| cholesterol | 0.316 | 1.12 |
| AJ | -0.64 | -0.373 |
| Bibs02 | 0.784 | 1.658 |
| Bibs02c | 0.855 | 2.025 |
| BL6 | -1.005 | 0.119 |
| BL6a | 0.088 | 0.739 |
| BXD01 | -0.26 | -0.136 |
| BXD010 | -0.834 | 0.062 |
| BXD011 | -0.661 | -0.133 |
| BXD03 | -0.151 | -1.048 |
| BXD04 | -0.366 | -0.723 |
| BXD05 | -0.197 | -0.14 |
| BXD06 | -0.761 | -0.669 |
| BXD07 | -0.982 | -0.144 |
| BXD08 | 0.171 | 0.297 |
| BXD09 | -0.415 | -0.31 |
| CAST | -0.46 | -1.155 |
| CCcont | 0.361 | 2.288 |
| DS01 | 0.238 | 0.431 |
| DS02 | 0.336 | 1.226 |
| DS04 | 1.875 | -0.202 |
| DS0c | 0.677 | 1.677 |
| GP01 | -0.127 | 0.26 |
| GP02 | -1.169 | -0.486 |
| GP0c | 0.406 | 0.485 |
| NOD | -1.165 | -0.789 |
| NZO | -1.475 | -0.845 |
| PWK | -1.067 | -1.147 |
| H37Rv_KO_CtpC | -0.354 | 1.007 |
| H37Rv_KO_CtpD | -0.325 | 0.819 |
| H37Rv_KO_Rv1272 | 0.181 | 0.134 |
| H37Rv_KO_SugABC | -0.42 | 0.918 |
| H37Rv_KO_MbtN | 1.039 | 0.61 |
| Trans05 | 0.393 | 0.698 |
| macrophage_unactivated | 1.597 | 2.468 |
| IL1 | 0.062 | -0.356 |
| Rapamycin | 0.368 | 0.0 |
| Tcell | -0.899 | -1.29 |
| GMCSF | 0.927 | -0.156 |
| IFNab | 1.747 | 1.076 |
| IFNg | 0.521 | -0.861 |
| IFNg_GMCSF1 | 0.892 | 0.349 |
| Rv1432_day32 | 0.98 | -0.13 |
| Rv1565c_day32 | -0.415 | 1.164 |
| secA2_input | -2.534 | -0.178 |
| delta_Rv3594 | 0.116 | 1.465 |
| delta_Rv3717 | -0.101 | 1.31 |
| delta_Rv3811 | 0.14 | 1.487 |
| delta_Rv0954 | -0.712 | 1.2 |
| PonA1 | -0.058 | 0.238 |
| EccD1_KO | -0.46 | -0.592 |
| EspI_KO | 0.125 | 0.553 |
| PE35_KO | -0.863 | 0.793 |
| PPE68_KO | -0.144 | 1.264 |
| glycerol2 | -0.412 | 0.189 |
| lignocerate | -0.6 | 0.856 |
| oleate | -0.169 | 0.116 |
| phosphatidylcholine | -0.766 | -0.253 |
| acetate | -1.004 | 0.924 |
| glucAc | -0.685 | 0.217 |
| Rv0950ko | -6.0 | -3.54 |
| Rv1096ko | 0.25 | -1.858 |
| Rv3684ko | 0.272 | 1.408 |
| delta_otsA_trehalose | -0.465 | 0.648 |