Top 10 genes with highest correlation to Rv0950c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3207c/- | (cc=0.6704) | info on Rv3207c/- |
| Rv1836c/- | (cc=0.6606) | info on Rv1836c/- |
| Rv2553c/- | (cc=0.6173) | info on Rv2553c/- |
| Rv2363/amiA2 | (cc=0.5803) | info on Rv2363/amiA2 |
| Rv2190c/- | (cc=0.5756) | info on Rv2190c/- |
| Rv3101c/ftsX | (cc=0.5694) | info on Rv3101c/ftsX |
| Rv1006/- | (cc=0.5395) | info on Rv1006/- |
| Rv3102c/ftsE | (cc=0.5186) | info on Rv3102c/ftsE |
| Rv1821/secA2 | (cc=0.5137) | info on Rv1821/secA2 |
| Rv0867c/rpfA | (cc=0.4933) | info on Rv0867c/rpfA |
Correlation of Rv0950c/- with Rv3207c/-
Normalized LFCs for Rv0950c/-:
(description and provenance of datasets)
| Rv0950c/- | Rv3207c/- | |
| Fe_supp_jason_reseq | 2.366 | 2.441 |
| low_pH_jason_reseq | -3.244 | -0.415 |
| NO_jason_reseq | -1.62 | -3.783 |
| B6_jason_reseq | -0.757 | -1.385 |
| MHCII_jason_reseq | 0.645 | 0.141 |
| Isoniazid02 | -0.597 | -1.224 |
| Rifampicin4 | -1.522 | -2.989 |
| Ethambutol3 | 0.056 | -0.546 |
| Meropenem3 | -0.135 | -0.283 |
| Vancomycin16 | -1.807 | -3.783 |
| Rv2680_day32 | 0.511 | 0.095 |
| H37Rv_KO_MarP | -2.272 | -5.574 |
| hypoxia_3wks | -1.196 | -2.759 |
| hypoxia_6wks | -1.297 | -3.101 |
| glycerol | -1.374 | 0.325 |
| cholesterol | 0.316 | 1.336 |
| AJ | -0.64 | -0.324 |
| Bibs02 | 0.784 | -0.775 |
| Bibs02c | 0.855 | -1.341 |
| BL6 | -1.005 | 0.292 |
| BL6a | 0.088 | 0.244 |
| BXD01 | -0.26 | 0.729 |
| BXD010 | -0.834 | -0.179 |
| BXD011 | -0.661 | 0.464 |
| BXD03 | -0.151 | 0.45 |
| BXD04 | -0.366 | -0.113 |
| BXD05 | -0.197 | 0.49 |
| BXD06 | -0.761 | 0.996 |
| BXD07 | -0.982 | 0.223 |
| BXD08 | 0.171 | -0.564 |
| BXD09 | -0.415 | 1.049 |
| CAST | -0.46 | -0.976 |
| CCcont | 0.361 | 2.818 |
| DS01 | 0.238 | -0.216 |
| DS02 | 0.336 | 1.045 |
| DS04 | 1.875 | 0.384 |
| DS0c | 0.677 | 0.652 |
| GP01 | -0.127 | 0.818 |
| GP02 | -1.169 | 0.638 |
| GP0c | 0.406 | -0.317 |
| NOD | -1.165 | -0.099 |
| NZO | -1.475 | -0.98 |
| PWK | -1.067 | -0.706 |
| H37Rv_KO_CtpC | -0.354 | 1.212 |
| H37Rv_KO_CtpD | -0.325 | 0.997 |
| H37Rv_KO_Rv1272 | 0.181 | 1.863 |
| H37Rv_KO_SugABC | -0.42 | 1.078 |
| H37Rv_KO_MbtN | 1.039 | 0.893 |
| Trans05 | 0.393 | 0.393 |
| macrophage_unactivated | 1.597 | 1.635 |
| IL1 | 0.062 | -0.86 |
| Rapamycin | 0.368 | 0.196 |
| Tcell | -0.899 | -0.691 |
| GMCSF | 0.927 | 1.428 |
| IFNab | 1.747 | 1.351 |
| IFNg | 0.521 | 0.492 |
| IFNg_GMCSF1 | 0.892 | 0.842 |
| Rv1432_day32 | 0.98 | 1.623 |
| Rv1565c_day32 | -0.415 | 0.218 |
| secA2_input | -2.534 | -1.027 |
| delta_Rv3594 | 0.116 | 0.344 |
| delta_Rv3717 | -0.101 | -0.098 |
| delta_Rv3811 | 0.14 | 0.315 |
| delta_Rv0954 | -0.712 | -1.018 |
| PonA1 | -0.058 | -0.416 |
| EccD1_KO | -0.46 | 0.648 |
| EspI_KO | 0.125 | 0.893 |
| PE35_KO | -0.863 | -0.968 |
| PPE68_KO | -0.144 | 0.266 |
| glycerol2 | -0.412 | 0.254 |
| lignocerate | -0.6 | -0.392 |
| oleate | -0.169 | -0.829 |
| phosphatidylcholine | -0.766 | -0.626 |
| acetate | -1.004 | 1.225 |
| glucAc | -0.685 | 0.572 |
| Rv0950ko | -6.0 | -5.5 |
| Rv1096ko | 0.25 | -0.335 |
| Rv3684ko | 0.272 | 0.783 |
| delta_otsA_trehalose | -0.465 | -0.052 |