Top 10 genes with highest correlation to Rv0948c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3039c/echA17 | (cc=0.423) | info on Rv3039c/echA17 |
| Rv1578c/- | (cc=0.4051) | info on Rv1578c/- |
| Rv2196/qcrB | (cc=0.4033) | info on Rv2196/qcrB |
| Rv1778c/- | (cc=0.3937) | info on Rv1778c/- |
| Rv0728c/serA2 | (cc=0.3777) | info on Rv0728c/serA2 |
| Rv0781/ptrBa | (cc=0.3763) | info on Rv0781/ptrBa |
| Rv1980c/mpt64 | (cc=0.3762) | info on Rv1980c/mpt64 |
| Rv1430/PE16 | (cc=0.3675) | info on Rv1430/PE16 |
| Rv3669/- | (cc=0.3665) | info on Rv3669/- |
| Rv1121/zwf1 | (cc=0.3648) | info on Rv1121/zwf1 |
Correlation of Rv0948c/- with Rv3669/-
Normalized LFCs for Rv0948c/-:
(description and provenance of datasets)
| Rv0948c/- | Rv3669/- | |
| Fe_supp_jason_reseq | 0.268 | 2.087 |
| low_pH_jason_reseq | -1.134 | -0.811 |
| NO_jason_reseq | -1.089 | -1.273 |
| B6_jason_reseq | 0.097 | 1.973 |
| MHCII_jason_reseq | 1.976 | -0.474 |
| Isoniazid02 | -0.637 | 0.21 |
| Rifampicin4 | -0.601 | 0.912 |
| Ethambutol3 | -0.13 | 0.617 |
| Meropenem3 | -0.173 | -0.409 |
| Vancomycin16 | -0.284 | 0.0 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | -0.521 | -0.669 |
| hypoxia_3wks | 0.451 | 0.267 |
| hypoxia_6wks | 1.439 | 2.362 |
| glycerol | -0.897 | -1.463 |
| cholesterol | -0.398 | 0.528 |
| AJ | -0.096 | -1.487 |
| Bibs02 | -1.183 | -1.673 |
| Bibs02c | -1.203 | -1.914 |
| BL6 | 0.496 | 0.053 |
| BL6a | 0.555 | -0.088 |
| BXD01 | 0.516 | -0.64 |
| BXD010 | 1.027 | 0.956 |
| BXD011 | 2.709 | 1.714 |
| BXD03 | 0.536 | 0.92 |
| BXD04 | 0.048 | -0.372 |
| BXD05 | 0.104 | 0.682 |
| BXD06 | 0.734 | 1.131 |
| BXD07 | 1.992 | 1.2 |
| BXD08 | -0.436 | -0.4 |
| BXD09 | 0.869 | 1.787 |
| CAST | -1.49 | -0.21 |
| CCcont | 0.0 | 1.049 |
| DS01 | 0.0 | -0.216 |
| DS02 | -1.251 | -0.531 |
| DS04 | -1.744 | -1.775 |
| DS0c | -2.167 | -1.985 |
| GP01 | -0.986 | -0.903 |
| GP02 | -0.831 | -0.761 |
| GP0c | -0.5 | -1.19 |
| NOD | 0.488 | -0.099 |
| NZO | 1.845 | -0.38 |
| PWK | 1.124 | 0.388 |
| H37Rv_KO_CtpC | 0.299 | 2.166 |
| H37Rv_KO_CtpD | -1.139 | -1.159 |
| H37Rv_KO_Rv1272 | -1.022 | -1.29 |
| H37Rv_KO_SugABC | -0.99 | -0.906 |
| H37Rv_KO_MbtN | -0.832 | -0.31 |
| Trans05 | -1.055 | -0.947 |
| macrophage_unactivated | -0.83 | 0.088 |
| IL1 | -0.472 | 2.334 |
| Rapamycin | 0.439 | 0.252 |
| Tcell | 0.098 | 0.0 |
| GMCSF | 1.7 | 1.809 |
| IFNab | 1.321 | 2.228 |
| IFNg | -0.802 | 0.69 |
| IFNg_GMCSF1 | -0.5 | 2.369 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 0.348 | -3.131 |
| delta_Rv3594 | -0.474 | 1.306 |
| delta_Rv3717 | -2.054 | 2.017 |
| delta_Rv3811 | -0.07 | 2.411 |
| delta_Rv0954 | 0.279 | -0.792 |
| PonA1 | -1.324 | 0.986 |
| EccD1_KO | -1.45 | 0.454 |
| EspI_KO | 2.852 | 2.852 |
| PE35_KO | 0.42 | 1.263 |
| PPE68_KO | 0.0 | 0.0 |
| glycerol2 | -0.413 | 0.0 |
| lignocerate | -1.499 | 0.32 |
| oleate | 0.181 | 0.0 |
| phosphatidylcholine | -0.934 | 0.0 |
| acetate | -1.332 | 1.998 |
| glucAc | -2.515 | 1.306 |
| Rv0950ko | 1.33 | -1.372 |
| Rv1096ko | -1.252 | -2.069 |
| Rv3684ko | -2.358 | -0.684 |
| delta_otsA_trehalose | -0.778 | -0.667 |