Top 10 genes with highest correlation to Rv0948c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3039c/echA17 | (cc=0.423) | info on Rv3039c/echA17 |
| Rv1578c/- | (cc=0.4051) | info on Rv1578c/- |
| Rv2196/qcrB | (cc=0.4033) | info on Rv2196/qcrB |
| Rv1778c/- | (cc=0.3937) | info on Rv1778c/- |
| Rv0728c/serA2 | (cc=0.3777) | info on Rv0728c/serA2 |
| Rv0781/ptrBa | (cc=0.3763) | info on Rv0781/ptrBa |
| Rv1980c/mpt64 | (cc=0.3762) | info on Rv1980c/mpt64 |
| Rv1430/PE16 | (cc=0.3675) | info on Rv1430/PE16 |
| Rv3669/- | (cc=0.3665) | info on Rv3669/- |
| Rv1121/zwf1 | (cc=0.3648) | info on Rv1121/zwf1 |
Correlation of Rv0948c/- with Rv1778c/-
Normalized LFCs for Rv0948c/-:
(description and provenance of datasets)
| Rv0948c/- | Rv1778c/- | |
| Fe_supp_jason_reseq | 0.268 | 1.766 |
| low_pH_jason_reseq | -1.134 | 1.456 |
| NO_jason_reseq | -1.089 | 1.578 |
| B6_jason_reseq | 0.097 | -0.237 |
| MHCII_jason_reseq | 1.976 | 0.265 |
| Isoniazid02 | -0.637 | 0.079 |
| Rifampicin4 | -0.601 | -1.208 |
| Ethambutol3 | -0.13 | 1.375 |
| Meropenem3 | -0.173 | -0.69 |
| Vancomycin16 | -0.284 | -0.355 |
| Rv2680_day32 | 0.0 | -1.595 |
| H37Rv_KO_MarP | -0.521 | -0.267 |
| hypoxia_3wks | 0.451 | 0.594 |
| hypoxia_6wks | 1.439 | 2.088 |
| glycerol | -0.897 | -1.678 |
| cholesterol | -0.398 | 0.812 |
| AJ | -0.096 | 2.558 |
| Bibs02 | -1.183 | -0.744 |
| Bibs02c | -1.203 | -0.071 |
| BL6 | 0.496 | 1.505 |
| BL6a | 0.555 | 1.716 |
| BXD01 | 0.516 | 1.324 |
| BXD010 | 1.027 | 0.743 |
| BXD011 | 2.709 | 1.006 |
| BXD03 | 0.536 | 0.25 |
| BXD04 | 0.048 | 1.637 |
| BXD05 | 0.104 | -0.248 |
| BXD06 | 0.734 | 0.55 |
| BXD07 | 1.992 | 1.91 |
| BXD08 | -0.436 | 0.608 |
| BXD09 | 0.869 | 0.22 |
| CAST | -1.49 | 0.0 |
| CCcont | 0.0 | 1.812 |
| DS01 | 0.0 | -0.164 |
| DS02 | -1.251 | -0.488 |
| DS04 | -1.744 | -0.992 |
| DS0c | -2.167 | 0.894 |
| GP01 | -0.986 | -0.749 |
| GP02 | -0.831 | -0.339 |
| GP0c | -0.5 | 1.182 |
| NOD | 0.488 | -1.276 |
| NZO | 1.845 | 1.607 |
| PWK | 1.124 | 0.897 |
| H37Rv_KO_CtpC | 0.299 | 0.254 |
| H37Rv_KO_CtpD | -1.139 | -1.256 |
| H37Rv_KO_Rv1272 | -1.022 | 1.711 |
| H37Rv_KO_SugABC | -0.99 | -1.171 |
| H37Rv_KO_MbtN | -0.832 | -0.231 |
| Trans05 | -1.055 | -0.044 |
| macrophage_unactivated | -0.83 | 0.546 |
| IL1 | -0.472 | 0.433 |
| Rapamycin | 0.439 | 1.7 |
| Tcell | 0.098 | 1.737 |
| GMCSF | 1.7 | -0.52 |
| IFNab | 1.321 | 0.686 |
| IFNg | -0.802 | -0.82 |
| IFNg_GMCSF1 | -0.5 | -0.845 |
| Rv1432_day32 | 0.0 | -0.258 |
| Rv1565c_day32 | 0.0 | -0.25 |
| secA2_input | 0.348 | -0.759 |
| delta_Rv3594 | -0.474 | -0.841 |
| delta_Rv3717 | -2.054 | -0.629 |
| delta_Rv3811 | -0.07 | 0.834 |
| delta_Rv0954 | 0.279 | -0.243 |
| PonA1 | -1.324 | -1.978 |
| EccD1_KO | -1.45 | 0.865 |
| EspI_KO | 2.852 | 0.95 |
| PE35_KO | 0.42 | 1.295 |
| PPE68_KO | 0.0 | 1.213 |
| glycerol2 | -0.413 | -2.061 |
| lignocerate | -1.499 | -1.286 |
| oleate | 0.181 | -2.196 |
| phosphatidylcholine | -0.934 | -1.375 |
| acetate | -1.332 | -1.049 |
| glucAc | -2.515 | -1.301 |
| Rv0950ko | 1.33 | 2.249 |
| Rv1096ko | -1.252 | 1.218 |
| Rv3684ko | -2.358 | 0.485 |
| delta_otsA_trehalose | -0.778 | -0.77 |