Top 10 genes with highest correlation to Rv0943c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0478/deoC | (cc=0.4425) | info on Rv0478/deoC |
| Rv3735/- | (cc=0.4209) | info on Rv3735/- |
| Rv0100/- | (cc=0.419) | info on Rv0100/- |
| Rv3141/fadB4 | (cc=0.4189) | info on Rv3141/fadB4 |
| Rv3741c/- | (cc=0.4173) | info on Rv3741c/- |
| Rv2833c/ugpB | (cc=0.4127) | info on Rv2833c/ugpB |
| Rv0494/- | (cc=0.4061) | info on Rv0494/- |
| Rv0463/- | (cc=0.4057) | info on Rv0463/- |
| Rv2417c/- | (cc=0.3941) | info on Rv2417c/- |
| Rv2318/uspC | (cc=0.3815) | info on Rv2318/uspC |
Correlation of Rv0943c/- with Rv0100/-
Normalized LFCs for Rv0943c/-:
(description and provenance of datasets)
| Rv0943c/- | Rv0100/- | |
| Fe_supp_jason_reseq | -0.636 | -1.157 |
| low_pH_jason_reseq | 0.283 | 0.35 |
| NO_jason_reseq | -0.058 | 0.116 |
| B6_jason_reseq | -0.556 | -2.098 |
| MHCII_jason_reseq | -0.54 | -3.594 |
| Isoniazid02 | 1.331 | 0.471 |
| Rifampicin4 | 0.69 | -0.788 |
| Ethambutol3 | 0.67 | -0.143 |
| Meropenem3 | 0.2 | 0.225 |
| Vancomycin16 | 0.703 | 0.698 |
| Rv2680_day32 | -1.037 | -2.779 |
| H37Rv_KO_MarP | 0.195 | -0.075 |
| hypoxia_3wks | -0.116 | 0.662 |
| hypoxia_6wks | 0.117 | -0.43 |
| glycerol | -0.328 | -0.085 |
| cholesterol | 0.236 | -0.963 |
| AJ | -0.015 | -5.057 |
| Bibs02 | 0.625 | -1.788 |
| Bibs02c | -0.246 | -1.234 |
| BL6 | 0.304 | -2.369 |
| BL6a | -0.013 | -0.591 |
| BXD01 | 0.098 | 0.07 |
| BXD010 | 0.332 | -0.177 |
| BXD011 | 0.854 | 0.163 |
| BXD03 | 0.519 | 0.766 |
| BXD04 | 0.345 | 0.041 |
| BXD05 | 0.473 | -0.93 |
| BXD06 | 0.611 | -1.533 |
| BXD07 | 0.386 | -0.63 |
| BXD08 | 1.259 | 1.03 |
| BXD09 | 0.089 | -0.952 |
| CAST | -0.652 | -4.897 |
| CCcont | 0.158 | -1.134 |
| DS01 | 0.719 | -0.77 |
| DS02 | 0.203 | 0.608 |
| DS04 | -1.057 | -4.455 |
| DS0c | 0.042 | -1.906 |
| GP01 | -0.215 | -1.681 |
| GP02 | 0.371 | -2.372 |
| GP0c | -0.653 | -0.633 |
| NOD | -0.199 | -4.553 |
| NZO | 0.09 | -5.306 |
| PWK | -0.607 | -4.628 |
| H37Rv_KO_CtpC | 0.265 | -0.739 |
| H37Rv_KO_CtpD | 0.0 | 0.185 |
| H37Rv_KO_Rv1272 | -0.474 | -0.627 |
| H37Rv_KO_SugABC | -1.462 | -2.275 |
| H37Rv_KO_MbtN | -0.72 | -0.201 |
| Trans05 | 0.205 | -0.938 |
| macrophage_unactivated | -0.095 | 1.54 |
| IL1 | 0.569 | -1.109 |
| Rapamycin | 0.282 | -0.249 |
| Tcell | -0.072 | 1.15 |
| GMCSF | -0.343 | -0.628 |
| IFNab | 0.088 | 1.212 |
| IFNg | 0.564 | -0.171 |
| IFNg_GMCSF1 | 0.091 | -0.635 |
| Rv1432_day32 | -0.28 | -4.427 |
| Rv1565c_day32 | -0.104 | -3.532 |
| secA2_input | -0.412 | -0.385 |
| delta_Rv3594 | 0.0 | -1.621 |
| delta_Rv3717 | -0.454 | -1.655 |
| delta_Rv3811 | -0.537 | -0.589 |
| delta_Rv0954 | -0.395 | -1.932 |
| PonA1 | 0.519 | -3.653 |
| EccD1_KO | 0.612 | -0.145 |
| EspI_KO | -0.071 | 0.254 |
| PE35_KO | 0.143 | -0.21 |
| PPE68_KO | 0.157 | -0.4 |
| glycerol2 | -0.115 | 0.198 |
| lignocerate | 0.485 | -1.262 |
| oleate | 0.302 | 0.449 |
| phosphatidylcholine | 0.325 | -0.465 |
| acetate | 0.482 | -1.234 |
| glucAc | 0.21 | -3.631 |
| Rv0950ko | 1.107 | 1.393 |
| Rv1096ko | 0.832 | 0.796 |
| Rv3684ko | 1.297 | 1.411 |
| delta_otsA_trehalose | -0.766 | 0.192 |