Top 10 genes with highest correlation to Rv0941c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3521/- | (cc=0.5384) | info on Rv3521/- |
| Rv0779c/- | (cc=0.5133) | info on Rv0779c/- |
| Rv3265c/wbbL1 | (cc=0.4732) | info on Rv3265c/wbbL1 |
| Rv2892c/PPE45 | (cc=0.4615) | info on Rv2892c/PPE45 |
| Rv3144c/PPE52 | (cc=0.4482) | info on Rv3144c/PPE52 |
| Rv2971/- | (cc=0.4419) | info on Rv2971/- |
| Rv3831/- | (cc=0.4288) | info on Rv3831/- |
| Rv1735c/- | (cc=0.4243) | info on Rv1735c/- |
| Rv0765c/- | (cc=0.4096) | info on Rv0765c/- |
| Rv0578c/PE_PGRS7 | (cc=0.4039) | info on Rv0578c/PE_PGRS7 |
Correlation of Rv0941c/- with Rv0779c/-
Normalized LFCs for Rv0941c/-:
(description and provenance of datasets)
| Rv0941c/- | Rv0779c/- | |
| Fe_supp_jason_reseq | -0.985 | -0.363 |
| low_pH_jason_reseq | -0.522 | 0.263 |
| NO_jason_reseq | 0.302 | -0.126 |
| B6_jason_reseq | -0.074 | -2.475 |
| MHCII_jason_reseq | -0.103 | -2.55 |
| Isoniazid02 | 0.604 | 1.315 |
| Rifampicin4 | 0.579 | 0.36 |
| Ethambutol3 | 0.759 | 0.213 |
| Meropenem3 | 0.357 | -0.371 |
| Vancomycin16 | 1.021 | 0.878 |
| Rv2680_day32 | -0.36 | -1.013 |
| H37Rv_KO_MarP | 0.426 | -0.258 |
| hypoxia_3wks | 0.327 | 0.49 |
| hypoxia_6wks | 0.013 | -0.796 |
| glycerol | 0.527 | 0.195 |
| cholesterol | 0.182 | 0.118 |
| AJ | -0.057 | 0.114 |
| Bibs02 | 0.936 | -0.791 |
| Bibs02c | -0.496 | -1.446 |
| BL6 | 0.184 | -2.385 |
| BL6a | -0.1 | -1.306 |
| BXD01 | 0.573 | -0.292 |
| BXD010 | 0.679 | 0.341 |
| BXD011 | 0.543 | -1.32 |
| BXD03 | 0.116 | -1.464 |
| BXD04 | -0.248 | -0.278 |
| BXD05 | 0.53 | -1.277 |
| BXD06 | 0.327 | -0.543 |
| BXD07 | 0.174 | -1.05 |
| BXD08 | 0.172 | -0.299 |
| BXD09 | 0.107 | -0.681 |
| CAST | -0.277 | -0.377 |
| CCcont | 0.065 | -2.847 |
| DS01 | 0.0 | 0.599 |
| DS02 | 0.774 | 1.977 |
| DS04 | 0.878 | 0.887 |
| DS0c | 0.262 | 0.401 |
| GP01 | 0.175 | -0.715 |
| GP02 | 0.951 | -1.075 |
| GP0c | 0.503 | 1.507 |
| NOD | 0.231 | -0.552 |
| NZO | 0.409 | 0.066 |
| PWK | -0.465 | -0.136 |
| H37Rv_KO_CtpC | 0.108 | -0.582 |
| H37Rv_KO_CtpD | 0.898 | -0.424 |
| H37Rv_KO_Rv1272 | 1.642 | -0.377 |
| H37Rv_KO_SugABC | 0.765 | -0.052 |
| H37Rv_KO_MbtN | -0.947 | -1.769 |
| Trans05 | 1.07 | 1.141 |
| macrophage_unactivated | -0.051 | -1.07 |
| IL1 | -0.047 | -0.418 |
| Rapamycin | -0.359 | -2.771 |
| Tcell | 0.684 | -0.834 |
| GMCSF | 0.536 | -0.895 |
| IFNab | -0.354 | -1.288 |
| IFNg | 0.39 | -0.476 |
| IFNg_GMCSF1 | -0.182 | -1.2 |
| Rv1432_day32 | -0.262 | 0.51 |
| Rv1565c_day32 | 0.889 | 0.0 |
| secA2_input | 0.672 | 0.232 |
| delta_Rv3594 | 0.366 | 0.054 |
| delta_Rv3717 | 0.545 | 0.0 |
| delta_Rv3811 | 0.626 | 1.117 |
| delta_Rv0954 | 0.559 | 1.337 |
| PonA1 | 0.089 | -0.824 |
| EccD1_KO | 0.335 | 0.21 |
| EspI_KO | 0.468 | 0.183 |
| PE35_KO | 0.709 | 0.187 |
| PPE68_KO | 0.736 | 0.304 |
| glycerol2 | -0.006 | -1.033 |
| lignocerate | -0.16 | -1.728 |
| oleate | -0.186 | -0.109 |
| phosphatidylcholine | 0.069 | -0.947 |
| acetate | -0.703 | -2.853 |
| glucAc | -0.533 | -3.643 |
| Rv0950ko | 1.269 | -0.223 |
| Rv1096ko | 1.004 | 0.971 |
| Rv3684ko | 0.907 | -0.121 |
| delta_otsA_trehalose | 0.811 | 0.858 |