Top 10 genes with highest correlation to Rv0930/pstA1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0928/pstS3 | (cc=0.9729) | info on Rv0928/pstS3 |
| Rv0929/pstC2 | (cc=0.9657) | info on Rv0929/pstC2 |
| Rv0820/phoT | (cc=0.9643) | info on Rv0820/phoT |
| Rv0818/- | (cc=0.8332) | info on Rv0818/- |
| Rv1925/fadD31 | (cc=0.7814) | info on Rv1925/fadD31 |
| Rv0924c/mntH | (cc=0.7748) | info on Rv0924c/mntH |
| Rv3050c/- | (cc=0.7595) | info on Rv3050c/- |
| Rv0989c/grcC2 | (cc=0.755) | info on Rv0989c/grcC2 |
| Rv0642c/mmaA4 | (cc=0.7414) | info on Rv0642c/mmaA4 |
| Rv1058/fadD14 | (cc=0.7318) | info on Rv1058/fadD14 |
Correlation of Rv0930/pstA1 with Rv0929/pstC2
Normalized LFCs for Rv0930/pstA1:
(description and provenance of datasets)
| Rv0930/pstA1 | Rv0929/pstC2 | |
| Fe_supp_jason_reseq | -3.511 | -2.603 |
| low_pH_jason_reseq | 1.514 | 3.033 |
| NO_jason_reseq | -4.528 | -2.625 |
| B6_jason_reseq | 0.559 | 1.639 |
| MHCII_jason_reseq | 0.542 | 0.514 |
| Isoniazid02 | -0.895 | -0.281 |
| Rifampicin4 | -2.475 | -3.831 |
| Ethambutol3 | -0.804 | 1.007 |
| Meropenem3 | -1.095 | -1.942 |
| Vancomycin16 | -0.873 | -1.647 |
| Rv2680_day32 | 4.124 | 3.528 |
| H37Rv_KO_MarP | -1.709 | -3.056 |
| hypoxia_3wks | -4.797 | -4.406 |
| hypoxia_6wks | -0.643 | -0.061 |
| glycerol | 2.384 | 1.599 |
| cholesterol | 3.675 | 3.859 |
| AJ | 2.151 | 0.573 |
| Bibs02 | 2.099 | 2.832 |
| Bibs02c | 3.109 | 1.441 |
| BL6 | 5.861 | 5.842 |
| BL6a | 6.0 | 6.0 |
| BXD01 | 6.0 | 6.0 |
| BXD010 | 6.0 | 6.0 |
| BXD011 | 6.0 | 6.0 |
| BXD03 | 5.702 | 5.602 |
| BXD04 | 6.0 | 6.0 |
| BXD05 | 6.0 | 6.0 |
| BXD06 | 6.0 | 6.0 |
| BXD07 | 6.0 | 6.0 |
| BXD08 | 6.0 | 6.0 |
| BXD09 | 6.0 | 6.0 |
| CAST | 3.707 | 2.361 |
| CCcont | 3.688 | 3.417 |
| DS01 | 1.591 | -0.352 |
| DS02 | 2.105 | 0.285 |
| DS04 | 2.995 | 3.18 |
| DS0c | 0.652 | 0.762 |
| GP01 | 5.309 | 4.532 |
| GP02 | 5.465 | 6.0 |
| GP0c | 6.0 | 6.0 |
| NOD | 2.758 | 0.295 |
| NZO | 2.082 | 0.38 |
| PWK | 4.287 | 2.384 |
| H37Rv_KO_CtpC | 4.761 | 4.283 |
| H37Rv_KO_CtpD | 1.322 | 2.232 |
| H37Rv_KO_Rv1272 | 4.933 | 5.607 |
| H37Rv_KO_SugABC | 4.965 | 5.047 |
| H37Rv_KO_MbtN | 6.0 | 6.0 |
| Trans05 | 5.408 | 5.884 |
| macrophage_unactivated | -2.285 | -2.509 |
| IL1 | -2.847 | -2.358 |
| Rapamycin | -3.428 | -3.686 |
| Tcell | -1.232 | -1.922 |
| GMCSF | -2.64 | -2.698 |
| IFNab | 2.833 | 3.419 |
| IFNg | -3.643 | -4.479 |
| IFNg_GMCSF1 | -4.515 | -5.156 |
| Rv1432_day32 | 6.0 | 6.0 |
| Rv1565c_day32 | -0.554 | 0.415 |
| secA2_input | -1.904 | -3.467 |
| delta_Rv3594 | 0.231 | 1.036 |
| delta_Rv3717 | 2.636 | 3.279 |
| delta_Rv3811 | 0.754 | 1.152 |
| delta_Rv0954 | -3.748 | -3.841 |
| PonA1 | -2.389 | -2.253 |
| EccD1_KO | -2.999 | -1.533 |
| EspI_KO | -2.923 | -1.974 |
| PE35_KO | -1.552 | -0.601 |
| PPE68_KO | -2.227 | -0.765 |
| glycerol2 | -5.348 | -4.614 |
| lignocerate | -1.016 | -2.423 |
| oleate | -5.412 | -4.669 |
| phosphatidylcholine | -3.438 | -3.748 |
| acetate | -0.605 | -0.83 |
| glucAc | -0.409 | -1.023 |
| Rv0950ko | -3.95 | -4.158 |
| Rv1096ko | 0.537 | 0.344 |
| Rv3684ko | -0.517 | -0.249 |
| delta_otsA_trehalose | 0.296 | -1.89 |