Top 10 genes with highest correlation to Rv0929/pstC2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0928/pstS3 | (cc=0.9699) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.9657) | info on Rv0930/pstA1 |
| Rv0820/phoT | (cc=0.9568) | info on Rv0820/phoT |
| Rv0818/- | (cc=0.8168) | info on Rv0818/- |
| Rv0924c/mntH | (cc=0.7927) | info on Rv0924c/mntH |
| Rv3050c/- | (cc=0.7818) | info on Rv3050c/- |
| Rv1925/fadD31 | (cc=0.7762) | info on Rv1925/fadD31 |
| Rv0989c/grcC2 | (cc=0.7603) | info on Rv0989c/grcC2 |
| Rv1058/fadD14 | (cc=0.7533) | info on Rv1058/fadD14 |
| Rv0642c/mmaA4 | (cc=0.7378) | info on Rv0642c/mmaA4 |
Correlation of Rv0929/pstC2 with Rv0924c/mntH
Normalized LFCs for Rv0929/pstC2:
(description and provenance of datasets)
| Rv0929/pstC2 | Rv0924c/mntH | |
| Fe_supp_jason_reseq | -2.603 | 1.692 |
| low_pH_jason_reseq | 3.033 | 1.233 |
| NO_jason_reseq | -2.625 | 1.436 |
| B6_jason_reseq | 1.639 | 2.841 |
| MHCII_jason_reseq | 0.514 | 2.374 |
| Isoniazid02 | -0.281 | -1.042 |
| Rifampicin4 | -3.831 | 0.244 |
| Ethambutol3 | 1.007 | -0.28 |
| Meropenem3 | -1.942 | 0.641 |
| Vancomycin16 | -1.647 | 0.122 |
| Rv2680_day32 | 3.528 | 1.386 |
| H37Rv_KO_MarP | -3.056 | -1.122 |
| hypoxia_3wks | -4.406 | -0.283 |
| hypoxia_6wks | -0.061 | 1.217 |
| glycerol | 1.599 | 2.576 |
| cholesterol | 3.859 | 3.672 |
| AJ | 0.573 | 0.923 |
| Bibs02 | 2.832 | 1.903 |
| Bibs02c | 1.441 | 2.178 |
| BL6 | 5.842 | 1.934 |
| BL6a | 6.0 | 2.894 |
| BXD01 | 6.0 | 3.309 |
| BXD010 | 6.0 | 2.855 |
| BXD011 | 6.0 | 2.877 |
| BXD03 | 5.602 | 2.406 |
| BXD04 | 6.0 | 1.451 |
| BXD05 | 6.0 | 2.001 |
| BXD06 | 6.0 | 3.414 |
| BXD07 | 6.0 | 3.667 |
| BXD08 | 6.0 | 3.339 |
| BXD09 | 6.0 | 2.832 |
| CAST | 2.361 | 0.224 |
| CCcont | 3.417 | 1.023 |
| DS01 | -0.352 | 1.619 |
| DS02 | 0.285 | 1.342 |
| DS04 | 3.18 | 2.561 |
| DS0c | 0.762 | 1.458 |
| GP01 | 4.532 | 3.433 |
| GP02 | 6.0 | 3.155 |
| GP0c | 6.0 | 4.026 |
| NOD | 0.295 | 1.256 |
| NZO | 0.38 | 2.373 |
| PWK | 2.384 | -0.156 |
| H37Rv_KO_CtpC | 4.283 | 1.597 |
| H37Rv_KO_CtpD | 2.232 | 0.289 |
| H37Rv_KO_Rv1272 | 5.607 | 3.042 |
| H37Rv_KO_SugABC | 5.047 | 2.396 |
| H37Rv_KO_MbtN | 6.0 | 3.313 |
| Trans05 | 5.884 | 3.114 |
| macrophage_unactivated | -2.509 | 0.237 |
| IL1 | -2.358 | -1.083 |
| Rapamycin | -3.686 | -0.445 |
| Tcell | -1.922 | 1.737 |
| GMCSF | -2.698 | -0.663 |
| IFNab | 3.419 | 0.0 |
| IFNg | -4.479 | -0.975 |
| IFNg_GMCSF1 | -5.156 | 0.588 |
| Rv1432_day32 | 6.0 | 2.155 |
| Rv1565c_day32 | 0.415 | 0.564 |
| secA2_input | -3.467 | 0.725 |
| delta_Rv3594 | 1.036 | 1.348 |
| delta_Rv3717 | 3.279 | 3.169 |
| delta_Rv3811 | 1.152 | 1.515 |
| delta_Rv0954 | -3.841 | -0.637 |
| PonA1 | -2.253 | -0.412 |
| EccD1_KO | -1.533 | -0.171 |
| EspI_KO | -1.974 | -0.305 |
| PE35_KO | -0.601 | -0.475 |
| PPE68_KO | -0.765 | 0.083 |
| glycerol2 | -4.614 | -0.762 |
| lignocerate | -2.423 | -1.208 |
| oleate | -4.669 | 0.113 |
| phosphatidylcholine | -3.748 | -1.556 |
| acetate | -0.83 | -0.587 |
| glucAc | -1.023 | -0.55 |
| Rv0950ko | -4.158 | -0.748 |
| Rv1096ko | 0.344 | 0.332 |
| Rv3684ko | -0.249 | 0.121 |
| delta_otsA_trehalose | -1.89 | -0.221 |