Top 10 genes with highest correlation to Rv0929/pstC2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0928/pstS3 | (cc=0.9699) | info on Rv0928/pstS3 |
| Rv0930/pstA1 | (cc=0.9657) | info on Rv0930/pstA1 |
| Rv0820/phoT | (cc=0.9568) | info on Rv0820/phoT |
| Rv0818/- | (cc=0.8168) | info on Rv0818/- |
| Rv0924c/mntH | (cc=0.7927) | info on Rv0924c/mntH |
| Rv3050c/- | (cc=0.7818) | info on Rv3050c/- |
| Rv1925/fadD31 | (cc=0.7762) | info on Rv1925/fadD31 |
| Rv0989c/grcC2 | (cc=0.7603) | info on Rv0989c/grcC2 |
| Rv1058/fadD14 | (cc=0.7533) | info on Rv1058/fadD14 |
| Rv0642c/mmaA4 | (cc=0.7378) | info on Rv0642c/mmaA4 |
Correlation of Rv0929/pstC2 with Rv0928/pstS3
Normalized LFCs for Rv0929/pstC2:
(description and provenance of datasets)
| Rv0929/pstC2 | Rv0928/pstS3 | |
| Fe_supp_jason_reseq | -2.603 | -3.391 |
| low_pH_jason_reseq | 3.033 | 1.549 |
| NO_jason_reseq | -2.625 | -3.363 |
| B6_jason_reseq | 1.639 | 0.406 |
| MHCII_jason_reseq | 0.514 | 0.372 |
| Isoniazid02 | -0.281 | 0.156 |
| Rifampicin4 | -3.831 | -4.059 |
| Ethambutol3 | 1.007 | -0.989 |
| Meropenem3 | -1.942 | -2.653 |
| Vancomycin16 | -1.647 | -2.26 |
| Rv2680_day32 | 3.528 | 3.982 |
| H37Rv_KO_MarP | -3.056 | -2.74 |
| hypoxia_3wks | -4.406 | -3.413 |
| hypoxia_6wks | -0.061 | 1.128 |
| glycerol | 1.599 | 4.051 |
| cholesterol | 3.859 | 3.767 |
| AJ | 0.573 | 1.99 |
| Bibs02 | 2.832 | 1.819 |
| Bibs02c | 1.441 | 2.23 |
| BL6 | 5.842 | 5.545 |
| BL6a | 6.0 | 6.0 |
| BXD01 | 6.0 | 6.0 |
| BXD010 | 6.0 | 6.0 |
| BXD011 | 6.0 | 6.0 |
| BXD03 | 5.602 | 5.608 |
| BXD04 | 6.0 | 6.0 |
| BXD05 | 6.0 | 6.0 |
| BXD06 | 6.0 | 6.0 |
| BXD07 | 6.0 | 6.0 |
| BXD08 | 6.0 | 6.0 |
| BXD09 | 6.0 | 6.0 |
| CAST | 2.361 | 2.334 |
| CCcont | 3.417 | 3.228 |
| DS01 | -0.352 | 0.0 |
| DS02 | 0.285 | 0.101 |
| DS04 | 3.18 | 2.0 |
| DS0c | 0.762 | 1.053 |
| GP01 | 4.532 | 5.887 |
| GP02 | 6.0 | 5.592 |
| GP0c | 6.0 | 6.0 |
| NOD | 0.295 | 0.649 |
| NZO | 0.38 | 2.227 |
| PWK | 2.384 | 4.575 |
| H37Rv_KO_CtpC | 4.283 | 3.13 |
| H37Rv_KO_CtpD | 2.232 | 1.414 |
| H37Rv_KO_Rv1272 | 5.607 | 4.357 |
| H37Rv_KO_SugABC | 5.047 | 3.955 |
| H37Rv_KO_MbtN | 6.0 | 6.0 |
| Trans05 | 5.884 | 5.513 |
| macrophage_unactivated | -2.509 | -2.632 |
| IL1 | -2.358 | -3.073 |
| Rapamycin | -3.686 | -3.492 |
| Tcell | -1.922 | -2.47 |
| GMCSF | -2.698 | -3.11 |
| IFNab | 3.419 | 2.618 |
| IFNg | -4.479 | -5.161 |
| IFNg_GMCSF1 | -5.156 | -4.672 |
| Rv1432_day32 | 6.0 | 6.0 |
| Rv1565c_day32 | 0.415 | -0.314 |
| secA2_input | -3.467 | -1.969 |
| delta_Rv3594 | 1.036 | -0.055 |
| delta_Rv3717 | 3.279 | 2.024 |
| delta_Rv3811 | 1.152 | 0.581 |
| delta_Rv0954 | -3.841 | -3.635 |
| PonA1 | -2.253 | -3.624 |
| EccD1_KO | -1.533 | -2.447 |
| EspI_KO | -1.974 | -1.258 |
| PE35_KO | -0.601 | -0.557 |
| PPE68_KO | -0.765 | -1.51 |
| glycerol2 | -4.614 | -4.89 |
| lignocerate | -2.423 | -1.422 |
| oleate | -4.669 | -3.927 |
| phosphatidylcholine | -3.748 | -2.553 |
| acetate | -0.83 | -0.17 |
| glucAc | -1.023 | -0.089 |
| Rv0950ko | -4.158 | -3.986 |
| Rv1096ko | 0.344 | 1.674 |
| Rv3684ko | -0.249 | 0.082 |
| delta_otsA_trehalose | -1.89 | -0.532 |