Top 10 genes with highest correlation to Rv0893c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1199c/- | (cc=0.5739) | info on Rv1199c/- |
| Rv2512c/- | (cc=0.5406) | info on Rv2512c/- |
| Rv0755c/PPE12 | (cc=0.5152) | info on Rv0755c/PPE12 |
| Rv1676/- | (cc=0.48) | info on Rv1676/- |
| Rv1260/- | (cc=0.4587) | info on Rv1260/- |
| Rv3115/- | (cc=0.4523) | info on Rv3115/- |
| Rv1597/- | (cc=0.4394) | info on Rv1597/- |
| Rv2176/pknL | (cc=0.4386) | info on Rv2176/pknL |
| Rv3679/- | (cc=0.4238) | info on Rv3679/- |
| Rv2432c/- | (cc=0.4196) | info on Rv2432c/- |
Correlation of Rv0893c/- with Rv3679/-
Normalized LFCs for Rv0893c/-:
(description and provenance of datasets)
| Rv0893c/- | Rv3679/- | |
| Fe_supp_jason_reseq | -1.626 | 1.354 |
| low_pH_jason_reseq | 0.448 | 1.747 |
| NO_jason_reseq | 0.953 | -1.42 |
| B6_jason_reseq | -0.449 | -0.752 |
| MHCII_jason_reseq | 0.189 | 1.103 |
| Isoniazid02 | 0.0 | -1.072 |
| Rifampicin4 | 0.0 | 0.252 |
| Ethambutol3 | -0.281 | -0.297 |
| Meropenem3 | -0.435 | -0.161 |
| Vancomycin16 | 0.528 | 0.085 |
| Rv2680_day32 | 0.337 | 1.078 |
| H37Rv_KO_MarP | 0.26 | -0.969 |
| hypoxia_3wks | 0.183 | 0.0 |
| hypoxia_6wks | 0.691 | -0.24 |
| glycerol | 0.66 | 3.461 |
| cholesterol | 0.358 | 2.365 |
| AJ | 0.232 | 0.0 |
| Bibs02 | 2.078 | 1.999 |
| Bibs02c | 0.684 | 2.102 |
| BL6 | 0.0 | 1.623 |
| BL6a | 0.544 | 2.108 |
| BXD01 | -0.361 | 0.994 |
| BXD010 | 0.513 | 2.069 |
| BXD011 | 0.315 | 2.333 |
| BXD03 | 0.664 | 1.903 |
| BXD04 | 0.66 | 0.896 |
| BXD05 | 1.397 | 0.919 |
| BXD06 | 0.401 | 1.533 |
| BXD07 | 0.182 | 1.662 |
| BXD08 | -0.431 | 1.016 |
| BXD09 | 0.268 | 1.323 |
| CAST | 0.078 | -0.402 |
| CCcont | -0.053 | 1.867 |
| DS01 | 1.947 | 1.803 |
| DS02 | 1.613 | 1.297 |
| DS04 | 1.192 | 2.228 |
| DS0c | 1.332 | 1.293 |
| GP01 | -0.715 | 0.589 |
| GP02 | -0.159 | 0.124 |
| GP0c | 0.694 | 2.228 |
| NOD | -0.08 | 1.44 |
| NZO | 0.068 | -0.548 |
| PWK | -0.216 | -0.539 |
| H37Rv_KO_CtpC | 1.028 | 0.353 |
| H37Rv_KO_CtpD | 1.658 | 0.865 |
| H37Rv_KO_Rv1272 | 1.093 | -0.246 |
| H37Rv_KO_SugABC | 0.751 | 0.278 |
| H37Rv_KO_MbtN | -0.24 | 0.408 |
| Trans05 | -0.363 | -0.109 |
| macrophage_unactivated | -0.275 | -0.234 |
| IL1 | -0.258 | -0.694 |
| Rapamycin | -0.703 | -0.466 |
| Tcell | -0.433 | -0.241 |
| GMCSF | -0.605 | -1.096 |
| IFNab | 0.0 | 0.795 |
| IFNg | -0.484 | -0.198 |
| IFNg_GMCSF1 | -0.88 | -0.478 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.234 | 0.0 |
| secA2_input | -0.787 | -3.694 |
| delta_Rv3594 | 0.616 | 1.341 |
| delta_Rv3717 | -0.185 | 1.609 |
| delta_Rv3811 | 0.321 | 0.995 |
| delta_Rv0954 | -0.328 | -1.739 |
| PonA1 | -0.293 | 0.684 |
| EccD1_KO | 0.263 | 0.901 |
| EspI_KO | 0.117 | -0.063 |
| PE35_KO | 0.455 | -1.068 |
| PPE68_KO | -0.272 | -0.745 |
| glycerol2 | 0.559 | -0.193 |
| lignocerate | 0.913 | 0.153 |
| oleate | -0.411 | -0.196 |
| phosphatidylcholine | 0.559 | -0.193 |
| acetate | 0.743 | 0.209 |
| glucAc | 0.605 | 0.891 |
| Rv0950ko | -0.899 | -1.251 |
| Rv1096ko | -0.633 | -1.155 |
| Rv3684ko | -1.074 | -1.575 |
| delta_otsA_trehalose | -0.491 | 2.288 |