Top 10 genes with highest correlation to Rv0893c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1199c/- | (cc=0.5739) | info on Rv1199c/- |
| Rv2512c/- | (cc=0.5406) | info on Rv2512c/- |
| Rv0755c/PPE12 | (cc=0.5152) | info on Rv0755c/PPE12 |
| Rv1676/- | (cc=0.48) | info on Rv1676/- |
| Rv1260/- | (cc=0.4587) | info on Rv1260/- |
| Rv3115/- | (cc=0.4523) | info on Rv3115/- |
| Rv1597/- | (cc=0.4394) | info on Rv1597/- |
| Rv2176/pknL | (cc=0.4386) | info on Rv2176/pknL |
| Rv3679/- | (cc=0.4238) | info on Rv3679/- |
| Rv2432c/- | (cc=0.4196) | info on Rv2432c/- |
Correlation of Rv0893c/- with Rv1260/-
Normalized LFCs for Rv0893c/-:
(description and provenance of datasets)
| Rv0893c/- | Rv1260/- | |
| Fe_supp_jason_reseq | -1.626 | -1.051 |
| low_pH_jason_reseq | 0.448 | -0.555 |
| NO_jason_reseq | 0.953 | -0.743 |
| B6_jason_reseq | -0.449 | 0.641 |
| MHCII_jason_reseq | 0.189 | 0.565 |
| Isoniazid02 | 0.0 | 0.247 |
| Rifampicin4 | 0.0 | -0.141 |
| Ethambutol3 | -0.281 | -0.032 |
| Meropenem3 | -0.435 | 0.0 |
| Vancomycin16 | 0.528 | -0.138 |
| Rv2680_day32 | 0.337 | -0.597 |
| H37Rv_KO_MarP | 0.26 | -0.214 |
| hypoxia_3wks | 0.183 | 0.0 |
| hypoxia_6wks | 0.691 | 0.148 |
| glycerol | 0.66 | 0.607 |
| cholesterol | 0.358 | 0.847 |
| AJ | 0.232 | 0.225 |
| Bibs02 | 2.078 | 0.758 |
| Bibs02c | 0.684 | 0.674 |
| BL6 | 0.0 | -1.235 |
| BL6a | 0.544 | 0.165 |
| BXD01 | -0.361 | 0.074 |
| BXD010 | 0.513 | 0.717 |
| BXD011 | 0.315 | 0.437 |
| BXD03 | 0.664 | -0.573 |
| BXD04 | 0.66 | -0.194 |
| BXD05 | 1.397 | -0.08 |
| BXD06 | 0.401 | -0.209 |
| BXD07 | 0.182 | -0.082 |
| BXD08 | -0.431 | -0.277 |
| BXD09 | 0.268 | -0.062 |
| CAST | 0.078 | 0.484 |
| CCcont | -0.053 | -0.209 |
| DS01 | 1.947 | 0.785 |
| DS02 | 1.613 | 0.857 |
| DS04 | 1.192 | 0.475 |
| DS0c | 1.332 | 0.767 |
| GP01 | -0.715 | -1.091 |
| GP02 | -0.159 | 0.286 |
| GP0c | 0.694 | -0.669 |
| NOD | -0.08 | 1.258 |
| NZO | 0.068 | -0.525 |
| PWK | -0.216 | 0.674 |
| H37Rv_KO_CtpC | 1.028 | 0.221 |
| H37Rv_KO_CtpD | 1.658 | 0.608 |
| H37Rv_KO_Rv1272 | 1.093 | 0.439 |
| H37Rv_KO_SugABC | 0.751 | -0.122 |
| H37Rv_KO_MbtN | -0.24 | 0.611 |
| Trans05 | -0.363 | -0.161 |
| macrophage_unactivated | -0.275 | -0.136 |
| IL1 | -0.258 | -1.317 |
| Rapamycin | -0.703 | -1.022 |
| Tcell | -0.433 | 0.202 |
| GMCSF | -0.605 | -1.172 |
| IFNab | 0.0 | -0.692 |
| IFNg | -0.484 | -0.484 |
| IFNg_GMCSF1 | -0.88 | -0.962 |
| Rv1432_day32 | 0.0 | -0.012 |
| Rv1565c_day32 | 0.234 | 0.066 |
| secA2_input | -0.787 | -1.687 |
| delta_Rv3594 | 0.616 | 0.0 |
| delta_Rv3717 | -0.185 | -0.029 |
| delta_Rv3811 | 0.321 | 0.034 |
| delta_Rv0954 | -0.328 | -0.992 |
| PonA1 | -0.293 | -0.226 |
| EccD1_KO | 0.263 | -0.414 |
| EspI_KO | 0.117 | 0.328 |
| PE35_KO | 0.455 | 0.335 |
| PPE68_KO | -0.272 | 0.442 |
| glycerol2 | 0.559 | 0.708 |
| lignocerate | 0.913 | 0.547 |
| oleate | -0.411 | 0.489 |
| phosphatidylcholine | 0.559 | 1.273 |
| acetate | 0.743 | -0.033 |
| glucAc | 0.605 | 0.02 |
| Rv0950ko | -0.899 | 0.112 |
| Rv1096ko | -0.633 | 0.326 |
| Rv3684ko | -1.074 | 0.0 |
| delta_otsA_trehalose | -0.491 | -0.654 |