Top 10 genes with highest correlation to Rv0892/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0778/cyp126 | (cc=0.5985) | info on Rv0778/cyp126 |
| Rv1709/scpA | (cc=0.5404) | info on Rv1709/scpA |
| Rv0885/- | (cc=0.4887) | info on Rv0885/- |
| Rv2543/lppA | (cc=0.4789) | info on Rv2543/lppA |
| Rv1358/- | (cc=0.4726) | info on Rv1358/- |
| Rv1397c/vapC10 | (cc=0.4658) | info on Rv1397c/vapC10 |
| Rv2537c/aroD | (cc=0.4595) | info on Rv2537c/aroD |
| Rv3382c/lytB1 | (cc=0.4571) | info on Rv3382c/lytB1 |
| Rv1059/- | (cc=0.4569) | info on Rv1059/- |
| Rv0003/recF | (cc=0.4535) | info on Rv0003/recF |
Correlation of Rv0892/- with Rv2537c/aroD
Normalized LFCs for Rv0892/-:
(description and provenance of datasets)
| Rv0892/- | Rv2537c/aroD | |
| Fe_supp_jason_reseq | 2.0 | 1.148 |
| low_pH_jason_reseq | 0.146 | -1.29 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | 1.447 | -1.704 |
| MHCII_jason_reseq | 0.126 | -1.501 |
| Isoniazid02 | -0.333 | -0.167 |
| Rifampicin4 | 0.114 | -0.311 |
| Ethambutol3 | 0.0 | -0.14 |
| Meropenem3 | 1.435 | -0.138 |
| Vancomycin16 | 0.218 | 0.0 |
| Rv2680_day32 | -0.406 | 0.0 |
| H37Rv_KO_MarP | 0.0 | -1.662 |
| hypoxia_3wks | 0.207 | 0.459 |
| hypoxia_6wks | -0.228 | 0.464 |
| glycerol | -0.831 | -0.385 |
| cholesterol | 0.035 | -0.276 |
| AJ | 0.0 | 0.193 |
| Bibs02 | 0.699 | -0.348 |
| Bibs02c | 1.096 | -0.399 |
| BL6 | 0.796 | -0.238 |
| BL6a | 1.336 | 0.595 |
| BXD01 | 0.408 | 0.695 |
| BXD010 | 1.116 | 0.0 |
| BXD011 | 0.53 | 0.0 |
| BXD03 | 0.805 | 0.856 |
| BXD04 | 0.554 | 0.524 |
| BXD05 | 0.745 | -0.123 |
| BXD06 | 0.884 | 0.566 |
| BXD07 | 0.881 | 0.809 |
| BXD08 | 0.317 | 1.127 |
| BXD09 | 0.856 | 0.675 |
| CAST | 0.592 | -0.439 |
| CCcont | 0.0 | -0.285 |
| DS01 | 1.237 | -0.45 |
| DS02 | 0.904 | -0.414 |
| DS04 | 0.807 | 0.0 |
| DS0c | 0.792 | -0.413 |
| GP01 | -0.559 | -0.188 |
| GP02 | -0.507 | -0.159 |
| GP0c | -0.065 | -0.248 |
| NOD | 0.62 | -0.428 |
| NZO | -1.215 | -0.38 |
| PWK | 0.226 | -0.374 |
| H37Rv_KO_CtpC | 0.99 | 0.0 |
| H37Rv_KO_CtpD | 1.402 | 1.56 |
| H37Rv_KO_Rv1272 | 0.539 | -0.269 |
| H37Rv_KO_SugABC | 1.063 | 3.352 |
| H37Rv_KO_MbtN | 0.14 | -0.094 |
| Trans05 | 0.741 | 0.698 |
| macrophage_unactivated | 0.193 | 0.0 |
| IL1 | 0.881 | 0.0 |
| Rapamycin | 0.126 | 1.068 |
| Tcell | -0.068 | 0.209 |
| GMCSF | -0.055 | -0.177 |
| IFNab | -0.063 | 0.0 |
| IFNg | 0.0 | -0.369 |
| IFNg_GMCSF1 | 0.314 | 0.0 |
| Rv1432_day32 | -0.553 | -1.55 |
| Rv1565c_day32 | -0.227 | 0.0 |
| secA2_input | -0.639 | 0.628 |
| delta_Rv3594 | -0.05 | -1.071 |
| delta_Rv3717 | -0.174 | 0.378 |
| delta_Rv3811 | -0.1 | -0.564 |
| delta_Rv0954 | 0.238 | -0.398 |
| PonA1 | 0.037 | -1.154 |
| EccD1_KO | 0.704 | 1.23 |
| EspI_KO | 0.539 | 1.298 |
| PE35_KO | 0.837 | 0.971 |
| PPE68_KO | 0.442 | 0.486 |
| glycerol2 | -0.923 | -2.27 |
| lignocerate | -0.947 | -2.59 |
| oleate | -0.034 | -0.997 |
| phosphatidylcholine | -0.536 | -1.804 |
| acetate | -0.485 | -2.003 |
| glucAc | -1.084 | -3.156 |
| Rv0950ko | 0.887 | 0.247 |
| Rv1096ko | 0.271 | 0.0 |
| Rv3684ko | 0.075 | -0.593 |
| delta_otsA_trehalose | -1.314 | 0.544 |