Top 10 genes with highest correlation to Rv0892/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0778/cyp126 | (cc=0.5985) | info on Rv0778/cyp126 |
| Rv1709/scpA | (cc=0.5404) | info on Rv1709/scpA |
| Rv0885/- | (cc=0.4887) | info on Rv0885/- |
| Rv2543/lppA | (cc=0.4789) | info on Rv2543/lppA |
| Rv1358/- | (cc=0.4726) | info on Rv1358/- |
| Rv1397c/vapC10 | (cc=0.4658) | info on Rv1397c/vapC10 |
| Rv2537c/aroD | (cc=0.4595) | info on Rv2537c/aroD |
| Rv3382c/lytB1 | (cc=0.4571) | info on Rv3382c/lytB1 |
| Rv1059/- | (cc=0.4569) | info on Rv1059/- |
| Rv0003/recF | (cc=0.4535) | info on Rv0003/recF |
Correlation of Rv0892/- with Rv1397c/vapC10
Normalized LFCs for Rv0892/-:
(description and provenance of datasets)
| Rv0892/- | Rv1397c/vapC10 | |
| Fe_supp_jason_reseq | 2.0 | 0.586 |
| low_pH_jason_reseq | 0.146 | 2.312 |
| NO_jason_reseq | 0.0 | -1.26 |
| B6_jason_reseq | 1.447 | -0.488 |
| MHCII_jason_reseq | 0.126 | 0.427 |
| Isoniazid02 | -0.333 | 0.598 |
| Rifampicin4 | 0.114 | 0.558 |
| Ethambutol3 | 0.0 | 0.585 |
| Meropenem3 | 1.435 | 1.412 |
| Vancomycin16 | 0.218 | 0.655 |
| Rv2680_day32 | -0.406 | -0.628 |
| H37Rv_KO_MarP | 0.0 | 0.111 |
| hypoxia_3wks | 0.207 | -0.379 |
| hypoxia_6wks | -0.228 | -0.157 |
| glycerol | -0.831 | -0.784 |
| cholesterol | 0.035 | -0.681 |
| AJ | 0.0 | 0.898 |
| Bibs02 | 0.699 | -0.759 |
| Bibs02c | 1.096 | 0.074 |
| BL6 | 0.796 | 0.813 |
| BL6a | 1.336 | 1.702 |
| BXD01 | 0.408 | 1.228 |
| BXD010 | 1.116 | 2.436 |
| BXD011 | 0.53 | 1.238 |
| BXD03 | 0.805 | 0.094 |
| BXD04 | 0.554 | 1.092 |
| BXD05 | 0.745 | 1.537 |
| BXD06 | 0.884 | 0.918 |
| BXD07 | 0.881 | 0.965 |
| BXD08 | 0.317 | 0.799 |
| BXD09 | 0.856 | 2.116 |
| CAST | 0.592 | -0.085 |
| CCcont | 0.0 | 0.754 |
| DS01 | 1.237 | -1.247 |
| DS02 | 0.904 | 0.077 |
| DS04 | 0.807 | 0.521 |
| DS0c | 0.792 | 0.077 |
| GP01 | -0.559 | -1.467 |
| GP02 | -0.507 | -0.698 |
| GP0c | -0.065 | -0.99 |
| NOD | 0.62 | 1.058 |
| NZO | -1.215 | 0.139 |
| PWK | 0.226 | 0.831 |
| H37Rv_KO_CtpC | 0.99 | 1.132 |
| H37Rv_KO_CtpD | 1.402 | 1.384 |
| H37Rv_KO_Rv1272 | 0.539 | 1.458 |
| H37Rv_KO_SugABC | 1.063 | 1.626 |
| H37Rv_KO_MbtN | 0.14 | 2.195 |
| Trans05 | 0.741 | 1.174 |
| macrophage_unactivated | 0.193 | 0.767 |
| IL1 | 0.881 | 1.59 |
| Rapamycin | 0.126 | 2.108 |
| Tcell | -0.068 | 1.408 |
| GMCSF | -0.055 | 0.826 |
| IFNab | -0.063 | 0.466 |
| IFNg | 0.0 | 0.2 |
| IFNg_GMCSF1 | 0.314 | -0.135 |
| Rv1432_day32 | -0.553 | 0.218 |
| Rv1565c_day32 | -0.227 | 0.963 |
| secA2_input | -0.639 | 0.235 |
| delta_Rv3594 | -0.05 | -0.479 |
| delta_Rv3717 | -0.174 | -0.063 |
| delta_Rv3811 | -0.1 | -0.944 |
| delta_Rv0954 | 0.238 | -0.182 |
| PonA1 | 0.037 | -0.8 |
| EccD1_KO | 0.704 | 1.0 |
| EspI_KO | 0.539 | -0.904 |
| PE35_KO | 0.837 | -0.615 |
| PPE68_KO | 0.442 | 0.486 |
| glycerol2 | -0.923 | -1.234 |
| lignocerate | -0.947 | -1.03 |
| oleate | -0.034 | 0.448 |
| phosphatidylcholine | -0.536 | -0.812 |
| acetate | -0.485 | -0.512 |
| glucAc | -1.084 | -1.873 |
| Rv0950ko | 0.887 | 0.645 |
| Rv1096ko | 0.271 | 0.172 |
| Rv3684ko | 0.075 | 2.06 |
| delta_otsA_trehalose | -1.314 | -1.407 |