Top 10 genes with highest correlation to Rv0885/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2290/lppO | (cc=0.5668) | info on Rv2290/lppO |
| Rv1365c/rsfA | (cc=0.5363) | info on Rv1365c/rsfA |
| Rv0526/- | (cc=0.5171) | info on Rv0526/- |
| Rv0892/- | (cc=0.4887) | info on Rv0892/- |
| Rv1709/scpA | (cc=0.4681) | info on Rv1709/scpA |
| Rv2537c/aroD | (cc=0.468) | info on Rv2537c/aroD |
| Rv1346/mbtN | (cc=0.4615) | info on Rv1346/mbtN |
| Rv0395/- | (cc=0.4489) | info on Rv0395/- |
| Rv1312/- | (cc=0.4398) | info on Rv1312/- |
| Rv2922c/smc | (cc=0.4188) | info on Rv2922c/smc |
Correlation of Rv0885/- with Rv1312/-
Normalized LFCs for Rv0885/-:
(description and provenance of datasets)
| Rv0885/- | Rv1312/- | |
| Fe_supp_jason_reseq | 0.428 | 2.455 |
| low_pH_jason_reseq | 0.888 | -0.156 |
| NO_jason_reseq | -0.249 | -1.089 |
| B6_jason_reseq | -0.246 | -0.752 |
| MHCII_jason_reseq | 0.246 | 0.085 |
| Isoniazid02 | -0.492 | -1.214 |
| Rifampicin4 | -1.002 | -1.933 |
| Ethambutol3 | -0.681 | -0.49 |
| Meropenem3 | -0.502 | 0.0 |
| Vancomycin16 | 0.225 | 0.355 |
| Rv2680_day32 | -0.073 | 0.0 |
| H37Rv_KO_MarP | 0.072 | -1.291 |
| hypoxia_3wks | 0.04 | -0.522 |
| hypoxia_6wks | 0.184 | -1.094 |
| glycerol | -1.02 | -0.856 |
| cholesterol | 0.396 | 0.998 |
| AJ | 0.067 | -0.541 |
| Bibs02 | 0.567 | 1.922 |
| Bibs02c | -0.126 | 1.028 |
| BL6 | 0.701 | -0.53 |
| BL6a | 0.6 | 0.133 |
| BXD01 | 0.385 | 0.171 |
| BXD010 | 1.024 | 0.45 |
| BXD011 | 0.449 | -0.092 |
| BXD03 | 0.727 | 0.177 |
| BXD04 | 0.528 | 0.083 |
| BXD05 | 1.058 | -0.436 |
| BXD06 | 0.171 | 0.09 |
| BXD07 | 0.752 | -0.207 |
| BXD08 | 0.668 | -0.096 |
| BXD09 | 0.525 | -0.102 |
| CAST | 0.132 | 0.155 |
| CCcont | 0.657 | 1.322 |
| DS01 | 0.883 | 0.83 |
| DS02 | 1.341 | 0.972 |
| DS04 | 0.815 | 0.254 |
| DS0c | 1.116 | 0.536 |
| GP01 | -0.112 | -0.32 |
| GP02 | 0.578 | -0.353 |
| GP0c | -1.007 | -0.421 |
| NOD | 0.475 | -0.163 |
| NZO | -0.407 | -0.298 |
| PWK | -0.675 | -0.458 |
| H37Rv_KO_CtpC | 0.42 | 0.213 |
| H37Rv_KO_CtpD | 0.129 | 0.241 |
| H37Rv_KO_Rv1272 | -0.288 | 0.811 |
| H37Rv_KO_SugABC | 0.658 | -0.231 |
| H37Rv_KO_MbtN | -0.606 | -0.075 |
| Trans05 | 0.784 | -0.305 |
| macrophage_unactivated | -0.379 | -0.246 |
| IL1 | 0.475 | -0.475 |
| Rapamycin | -0.193 | -1.679 |
| Tcell | -0.049 | 0.469 |
| GMCSF | 0.198 | -1.751 |
| IFNab | 0.336 | -0.75 |
| IFNg | 0.446 | 0.0 |
| IFNg_GMCSF1 | 0.393 | -1.386 |
| Rv1432_day32 | -0.402 | -0.999 |
| Rv1565c_day32 | 0.265 | 0.532 |
| secA2_input | 0.302 | -0.266 |
| delta_Rv3594 | -0.023 | 1.234 |
| delta_Rv3717 | -0.346 | 0.214 |
| delta_Rv3811 | -0.489 | 0.617 |
| delta_Rv0954 | 0.611 | 1.477 |
| PonA1 | 1.442 | 1.469 |
| EccD1_KO | 0.944 | -0.28 |
| EspI_KO | 0.733 | 1.708 |
| PE35_KO | -0.295 | 1.902 |
| PPE68_KO | 0.339 | 2.086 |
| glycerol2 | -0.835 | -0.82 |
| lignocerate | -1.794 | -1.762 |
| oleate | -0.491 | -0.142 |
| phosphatidylcholine | -0.485 | -2.027 |
| acetate | -2.449 | -0.637 |
| glucAc | -1.323 | -0.938 |
| Rv0950ko | 0.033 | 0.232 |
| Rv1096ko | 0.648 | 0.522 |
| Rv3684ko | -0.183 | -0.642 |
| delta_otsA_trehalose | 0.522 | 1.129 |