Top 10 genes with highest correlation to Rv0876c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0016c/pbpA | (cc=0.5591) | info on Rv0016c/pbpA |
| Rv1821/secA2 | (cc=0.5382) | info on Rv1821/secA2 |
| Rv3207c/- | (cc=0.5306) | info on Rv3207c/- |
| Rv1565c/- | (cc=0.5271) | info on Rv1565c/- |
| Rv0867c/rpfA | (cc=0.5245) | info on Rv0867c/rpfA |
| Rv2176/pknL | (cc=0.5121) | info on Rv2176/pknL |
| Rv0050/ponA1 | (cc=0.512) | info on Rv0050/ponA1 |
| Rv1411c/lprG | (cc=0.51) | info on Rv1411c/lprG |
| Rv2922c/smc | (cc=0.5094) | info on Rv2922c/smc |
| Rv0260c/- | (cc=0.5065) | info on Rv0260c/- |
Correlation of Rv0876c/- with Rv1565c/-
Normalized LFCs for Rv0876c/-:
(description and provenance of datasets)
| Rv0876c/- | Rv1565c/- | |
| Fe_supp_jason_reseq | 1.877 | 4.537 |
| low_pH_jason_reseq | -0.793 | 0.156 |
| NO_jason_reseq | 0.15 | 0.475 |
| B6_jason_reseq | -0.617 | 0.881 |
| MHCII_jason_reseq | -0.922 | 0.603 |
| Isoniazid02 | -0.681 | -0.383 |
| Rifampicin4 | -0.872 | -0.523 |
| Ethambutol3 | -2.067 | -0.946 |
| Meropenem3 | 0.779 | 0.926 |
| Vancomycin16 | -1.005 | -2.064 |
| Rv2680_day32 | -0.917 | 0.413 |
| H37Rv_KO_MarP | -3.914 | -6.0 |
| hypoxia_3wks | 0.295 | -0.885 |
| hypoxia_6wks | -0.614 | -0.727 |
| glycerol | 2.24 | -0.168 |
| cholesterol | 1.282 | -0.398 |
| AJ | -0.388 | -0.637 |
| Bibs02 | 0.799 | -0.319 |
| Bibs02c | -0.887 | -0.365 |
| BL6 | 0.546 | 0.351 |
| BL6a | -0.077 | 0.555 |
| BXD01 | 0.274 | 0.365 |
| BXD010 | 0.227 | 0.0 |
| BXD011 | 0.68 | 0.759 |
| BXD03 | -0.109 | 0.0 |
| BXD04 | 0.508 | 0.49 |
| BXD05 | 0.148 | 0.533 |
| BXD06 | 0.401 | -0.111 |
| BXD07 | 0.375 | 0.0 |
| BXD08 | 0.321 | 0.103 |
| BXD09 | 0.75 | 0.109 |
| CAST | -1.113 | -0.632 |
| CCcont | 1.574 | 2.714 |
| DS01 | 0.0 | -0.648 |
| DS02 | 0.239 | -0.597 |
| DS04 | -0.325 | 1.244 |
| DS0c | 1.848 | -0.596 |
| GP01 | -0.363 | -0.271 |
| GP02 | -0.635 | -0.228 |
| GP0c | -1.22 | -0.108 |
| NOD | -0.825 | -0.392 |
| NZO | -0.845 | -0.548 |
| PWK | -0.158 | -0.539 |
| H37Rv_KO_CtpC | 1.569 | 0.968 |
| H37Rv_KO_CtpD | 0.306 | 0.355 |
| H37Rv_KO_Rv1272 | 0.651 | 1.542 |
| H37Rv_KO_SugABC | 1.071 | 0.995 |
| H37Rv_KO_MbtN | 1.17 | 1.407 |
| Trans05 | -0.344 | 0.195 |
| macrophage_unactivated | 0.511 | -0.83 |
| IL1 | 0.572 | -1.391 |
| Rapamycin | 0.497 | -1.439 |
| Tcell | 0.0 | -0.554 |
| GMCSF | 0.887 | 0.0 |
| IFNab | 1.097 | -0.248 |
| IFNg | 0.898 | 0.208 |
| IFNg_GMCSF1 | 0.314 | -0.258 |
| Rv1432_day32 | 0.213 | -1.374 |
| Rv1565c_day32 | -0.199 | 0.0 |
| secA2_input | -0.2 | -3.58 |
| delta_Rv3594 | -0.26 | 1.184 |
| delta_Rv3717 | -1.067 | 1.019 |
| delta_Rv3811 | 0.397 | 0.546 |
| delta_Rv0954 | -2.965 | -0.389 |
| PonA1 | -1.924 | -3.057 |
| EccD1_KO | -0.072 | -0.224 |
| EspI_KO | 0.388 | -0.023 |
| PE35_KO | -0.403 | -1.718 |
| PPE68_KO | 0.138 | -0.275 |
| glycerol2 | -0.213 | 0.369 |
| lignocerate | 0.044 | 0.462 |
| oleate | -0.804 | 0.0 |
| phosphatidylcholine | -0.27 | 0.193 |
| acetate | 0.116 | 1.273 |
| glucAc | 0.0 | 0.877 |
| Rv0950ko | 0.163 | -2.741 |
| Rv1096ko | -1.601 | -2.379 |
| Rv3684ko | -0.704 | -0.043 |
| delta_otsA_trehalose | -1.336 | -0.479 |