Top 10 genes with highest correlation to Rv0876c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0016c/pbpA | (cc=0.5591) | info on Rv0016c/pbpA |
| Rv1821/secA2 | (cc=0.5382) | info on Rv1821/secA2 |
| Rv3207c/- | (cc=0.5306) | info on Rv3207c/- |
| Rv1565c/- | (cc=0.5271) | info on Rv1565c/- |
| Rv0867c/rpfA | (cc=0.5245) | info on Rv0867c/rpfA |
| Rv2176/pknL | (cc=0.5121) | info on Rv2176/pknL |
| Rv0050/ponA1 | (cc=0.512) | info on Rv0050/ponA1 |
| Rv1411c/lprG | (cc=0.51) | info on Rv1411c/lprG |
| Rv2922c/smc | (cc=0.5094) | info on Rv2922c/smc |
| Rv0260c/- | (cc=0.5065) | info on Rv0260c/- |
Correlation of Rv0876c/- with Rv0050/ponA1
Normalized LFCs for Rv0876c/-:
(description and provenance of datasets)
| Rv0876c/- | Rv0050/ponA1 | |
| Fe_supp_jason_reseq | 1.877 | 0.508 |
| low_pH_jason_reseq | -0.793 | 0.192 |
| NO_jason_reseq | 0.15 | -0.16 |
| B6_jason_reseq | -0.617 | 0.777 |
| MHCII_jason_reseq | -0.922 | 0.058 |
| Isoniazid02 | -0.681 | -1.202 |
| Rifampicin4 | -0.872 | -1.156 |
| Ethambutol3 | -2.067 | -0.711 |
| Meropenem3 | 0.779 | -0.237 |
| Vancomycin16 | -1.005 | -4.51 |
| Rv2680_day32 | -0.917 | 0.058 |
| H37Rv_KO_MarP | -3.914 | -3.768 |
| hypoxia_3wks | 0.295 | -0.443 |
| hypoxia_6wks | -0.614 | -1.059 |
| glycerol | 2.24 | -0.146 |
| cholesterol | 1.282 | 0.398 |
| AJ | -0.388 | -0.644 |
| Bibs02 | 0.799 | -1.597 |
| Bibs02c | -0.887 | -0.399 |
| BL6 | 0.546 | 0.47 |
| BL6a | -0.077 | 0.319 |
| BXD01 | 0.274 | 0.322 |
| BXD010 | 0.227 | 0.316 |
| BXD011 | 0.68 | 0.966 |
| BXD03 | -0.109 | 0.604 |
| BXD04 | 0.508 | 0.634 |
| BXD05 | 0.148 | 0.877 |
| BXD06 | 0.401 | 0.33 |
| BXD07 | 0.375 | 0.452 |
| BXD08 | 0.321 | 1.558 |
| BXD09 | 0.75 | 0.69 |
| CAST | -1.113 | -0.439 |
| CCcont | 1.574 | 1.278 |
| DS01 | 0.0 | -0.084 |
| DS02 | 0.239 | -0.704 |
| DS04 | -0.325 | -0.453 |
| DS0c | 1.848 | 0.652 |
| GP01 | -0.363 | 0.396 |
| GP02 | -0.635 | 1.958 |
| GP0c | -1.22 | 1.151 |
| NOD | -0.825 | -0.428 |
| NZO | -0.845 | -0.553 |
| PWK | -0.158 | -0.831 |
| H37Rv_KO_CtpC | 1.569 | 0.213 |
| H37Rv_KO_CtpD | 0.306 | 0.566 |
| H37Rv_KO_Rv1272 | 0.651 | 0.048 |
| H37Rv_KO_SugABC | 1.071 | 1.16 |
| H37Rv_KO_MbtN | 1.17 | 0.484 |
| Trans05 | -0.344 | 0.249 |
| macrophage_unactivated | 0.511 | 0.65 |
| IL1 | 0.572 | 0.418 |
| Rapamycin | 0.497 | 1.188 |
| Tcell | 0.0 | 0.459 |
| GMCSF | 0.887 | 0.283 |
| IFNab | 1.097 | 0.72 |
| IFNg | 0.898 | 0.551 |
| IFNg_GMCSF1 | 0.314 | 0.748 |
| Rv1432_day32 | 0.213 | -1.068 |
| Rv1565c_day32 | -0.199 | 0.0 |
| secA2_input | -0.2 | -0.47 |
| delta_Rv3594 | -0.26 | 0.179 |
| delta_Rv3717 | -1.067 | -0.799 |
| delta_Rv3811 | 0.397 | 0.107 |
| delta_Rv0954 | -2.965 | -1.601 |
| PonA1 | -1.924 | -2.956 |
| EccD1_KO | -0.072 | -0.661 |
| EspI_KO | 0.388 | -0.761 |
| PE35_KO | -0.403 | -1.817 |
| PPE68_KO | 0.138 | -0.442 |
| glycerol2 | -0.213 | -1.582 |
| lignocerate | 0.044 | -1.61 |
| oleate | -0.804 | -1.733 |
| phosphatidylcholine | -0.27 | -2.001 |
| acetate | 0.116 | -0.291 |
| glucAc | 0.0 | -0.088 |
| Rv0950ko | 0.163 | -0.305 |
| Rv1096ko | -1.601 | -0.151 |
| Rv3684ko | -0.704 | 0.809 |
| delta_otsA_trehalose | -1.336 | 0.564 |