Top 10 genes with highest correlation to Rv0876c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0016c/pbpA | (cc=0.5591) | info on Rv0016c/pbpA |
| Rv1821/secA2 | (cc=0.5382) | info on Rv1821/secA2 |
| Rv3207c/- | (cc=0.5306) | info on Rv3207c/- |
| Rv1565c/- | (cc=0.5271) | info on Rv1565c/- |
| Rv0867c/rpfA | (cc=0.5245) | info on Rv0867c/rpfA |
| Rv2176/pknL | (cc=0.5121) | info on Rv2176/pknL |
| Rv0050/ponA1 | (cc=0.512) | info on Rv0050/ponA1 |
| Rv1411c/lprG | (cc=0.51) | info on Rv1411c/lprG |
| Rv2922c/smc | (cc=0.5094) | info on Rv2922c/smc |
| Rv0260c/- | (cc=0.5065) | info on Rv0260c/- |
Correlation of Rv0876c/- with Rv0016c/pbpA
Normalized LFCs for Rv0876c/-:
(description and provenance of datasets)
| Rv0876c/- | Rv0016c/pbpA | |
| Fe_supp_jason_reseq | 1.877 | 0.98 |
| low_pH_jason_reseq | -0.793 | -0.192 |
| NO_jason_reseq | 0.15 | -0.302 |
| B6_jason_reseq | -0.617 | -0.421 |
| MHCII_jason_reseq | -0.922 | 0.0 |
| Isoniazid02 | -0.681 | 0.0 |
| Rifampicin4 | -0.872 | -0.753 |
| Ethambutol3 | -2.067 | -1.837 |
| Meropenem3 | 0.779 | -1.495 |
| Vancomycin16 | -1.005 | -1.653 |
| Rv2680_day32 | -0.917 | -0.429 |
| H37Rv_KO_MarP | -3.914 | -3.2 |
| hypoxia_3wks | 0.295 | 0.638 |
| hypoxia_6wks | -0.614 | 1.161 |
| glycerol | 2.24 | 1.549 |
| cholesterol | 1.282 | 0.773 |
| AJ | -0.388 | -0.212 |
| Bibs02 | 0.799 | 1.686 |
| Bibs02c | -0.887 | 0.174 |
| BL6 | 0.546 | 0.731 |
| BL6a | -0.077 | 0.462 |
| BXD01 | 0.274 | 0.626 |
| BXD010 | 0.227 | 0.299 |
| BXD011 | 0.68 | 0.0 |
| BXD03 | -0.109 | 0.0 |
| BXD04 | 0.508 | 0.524 |
| BXD05 | 0.148 | 0.915 |
| BXD06 | 0.401 | 0.401 |
| BXD07 | 0.375 | 0.416 |
| BXD08 | 0.321 | 0.639 |
| BXD09 | 0.75 | 0.226 |
| CAST | -1.113 | 0.37 |
| CCcont | 1.574 | 1.206 |
| DS01 | 0.0 | 0.197 |
| DS02 | 0.239 | 0.35 |
| DS04 | -0.325 | 0.707 |
| DS0c | 1.848 | 0.0 |
| GP01 | -0.363 | 0.979 |
| GP02 | -0.635 | 0.194 |
| GP0c | -1.22 | 1.289 |
| NOD | -0.825 | 0.0 |
| NZO | -0.845 | -0.38 |
| PWK | -0.158 | -0.374 |
| H37Rv_KO_CtpC | 1.569 | 0.592 |
| H37Rv_KO_CtpD | 0.306 | 1.56 |
| H37Rv_KO_Rv1272 | 0.651 | 0.424 |
| H37Rv_KO_SugABC | 1.071 | 0.627 |
| H37Rv_KO_MbtN | 1.17 | 0.376 |
| Trans05 | -0.344 | 0.0 |
| macrophage_unactivated | 0.511 | 0.246 |
| IL1 | 0.572 | 0.231 |
| Rapamycin | 0.497 | -0.807 |
| Tcell | 0.0 | 0.0 |
| GMCSF | 0.887 | -0.449 |
| IFNab | 1.097 | 0.236 |
| IFNg | 0.898 | 0.0 |
| IFNg_GMCSF1 | 0.314 | 0.698 |
| Rv1432_day32 | 0.213 | 0.763 |
| Rv1565c_day32 | -0.199 | 0.0 |
| secA2_input | -0.2 | -1.061 |
| delta_Rv3594 | -0.26 | 0.639 |
| delta_Rv3717 | -1.067 | -0.179 |
| delta_Rv3811 | 0.397 | 0.666 |
| delta_Rv0954 | -2.965 | -3.542 |
| PonA1 | -1.924 | -2.49 |
| EccD1_KO | -0.072 | -0.977 |
| EspI_KO | 0.388 | -1.346 |
| PE35_KO | -0.403 | 1.187 |
| PPE68_KO | 0.138 | 0.41 |
| glycerol2 | -0.213 | -2.276 |
| lignocerate | 0.044 | -1.707 |
| oleate | -0.804 | -1.988 |
| phosphatidylcholine | -0.27 | -2.274 |
| acetate | 0.116 | -0.756 |
| glucAc | 0.0 | -0.585 |
| Rv0950ko | 0.163 | -2.023 |
| Rv1096ko | -1.601 | -1.867 |
| Rv3684ko | -0.704 | 0.714 |
| delta_otsA_trehalose | -1.336 | 0.478 |