TnSeqCorr

Top 10 genes with highest correlation to Rv0864/moaC2:

update plotcorrelationlink to info on gene
Rv3400/- (cc=0.4401) info on Rv3400/-
Rv3564/fadE33 (cc=0.3799) info on Rv3564/fadE33
Rv1687c/- (cc=0.3661) info on Rv1687c/-
Rv3639c/- (cc=0.3655) info on Rv3639c/-
Rv0498/- (cc=0.3611) info on Rv0498/-
Rv1256c/cyp130 (cc=0.3554) info on Rv1256c/cyp130
Rv2417c/- (cc=0.3511) info on Rv2417c/-
Rv2927c/- (cc=0.3498) info on Rv2927c/-
Rv0923c/- (cc=0.3408) info on Rv0923c/-
Rv3121/cyp141 (cc=0.3403) info on Rv3121/cyp141

Correlation of Rv0864/moaC2 with Rv1687c/-

Normalized LFCs for Rv0864/moaC2:
(description and provenance of datasets)
Rv0864/moaC2Rv1687c/-
Fe_supp_jason_reseq

0.128

0.33

low_pH_jason_reseq

-0.31

-0.485

NO_jason_reseq

0.071

-1.139

B6_jason_reseq

-2.9

-0.373

MHCII_jason_reseq

-0.034

-0.581

Isoniazid02

-0.192

-0.13

Rifampicin4

-0.26

-0.368

Ethambutol3

-0.161

-0.185

Meropenem3

0.987

0.165

Vancomycin16

0.57

0.077

Rv2680_day32

0.215

-1.406

H37Rv_KO_MarP

1.013

1.225

hypoxia_3wks

-0.028

1.16

hypoxia_6wks

-0.635

0.497

glycerol

0.266

0.765

cholesterol

-0.218

0.832

AJ

-0.721

-0.619

Bibs02

-0.363

-0.228

Bibs02c

-0.246

0.206

BL6

-0.075

-0.178

BL6a

0.156

-0.215

BXD01

-0.136

-0.373

BXD010

0.704

0.143

BXD011

0.207

-0.159

BXD03

-0.15

-0.742

BXD04

-0.606

-0.878

BXD05

0.669

-0.019

BXD06

0.061

-0.04

BXD07

0.131

-0.66

BXD08

-0.361

-0.573

BXD09

0.276

0.503

CAST

-0.983

-0.14

CCcont

0.301

-0.37

DS01

-0.293

0.64

DS02

0.384

0.354

DS04

0.677

1.195

DS0c

0.519

0.512

GP01

-0.493

0.343

GP02

-0.081

-1.352

GP0c

-0.353

-0.423

NOD

2.301

2.738

NZO

-0.513

-0.059

PWK

-0.07

0.509

H37Rv_KO_CtpC

-0.651

-0.7

H37Rv_KO_CtpD

-0.363

-0.663

H37Rv_KO_Rv1272

-0.067

0.534

H37Rv_KO_SugABC

-0.972

-1.312

H37Rv_KO_MbtN

0.602

-0.063

Trans05

-0.678

0.522

macrophage_unactivated

0.603

0.874

IL1

-0.397

2.394

Rapamycin

-0.018

1.252

Tcell

-0.505

1.463

GMCSF

0.663

2.337

IFNab

1.119

1.418

IFNg

0.569

1.563

IFNg_GMCSF1

0.493

1.537

Rv1432_day32

-0.415

-0.232

Rv1565c_day32

0.063

0.842

secA2_input

-0.598

-0.628

delta_Rv3594

-0.044

-0.33

delta_Rv3717

-0.313

0.445

delta_Rv3811

0.164

0.199

delta_Rv0954

-0.028

-0.756

PonA1

-0.709

1.38

EccD1_KO

0.299

-0.25

EspI_KO

0.374

0.679

PE35_KO

0.289

-0.965

PPE68_KO

0.189

-1.366

glycerol2

0.258

-0.206

lignocerate

0.588

-0.425

oleate

0.413

-0.044

phosphatidylcholine

0.471

-0.134

acetate

-0.432

-0.078

glucAc

0.125

-0.402

Rv0950ko

0.193

0.096

Rv1096ko

0.923

0.63

Rv3684ko

0.023

-0.861

delta_otsA_trehalose

0.191

1.047