TnSeqCorr

Top 10 genes with highest correlation to Rv0864/moaC2:

update plotcorrelationlink to info on gene
Rv3400/- (cc=0.4401) info on Rv3400/-
Rv3564/fadE33 (cc=0.3799) info on Rv3564/fadE33
Rv1687c/- (cc=0.3661) info on Rv1687c/-
Rv3639c/- (cc=0.3655) info on Rv3639c/-
Rv0498/- (cc=0.3611) info on Rv0498/-
Rv1256c/cyp130 (cc=0.3554) info on Rv1256c/cyp130
Rv2417c/- (cc=0.3511) info on Rv2417c/-
Rv2927c/- (cc=0.3498) info on Rv2927c/-
Rv0923c/- (cc=0.3408) info on Rv0923c/-
Rv3121/cyp141 (cc=0.3403) info on Rv3121/cyp141

Correlation of Rv0864/moaC2 with Rv1256c/cyp130

Normalized LFCs for Rv0864/moaC2:
(description and provenance of datasets)
Rv0864/moaC2Rv1256c/cyp130
Fe_supp_jason_reseq

0.128

0.076

low_pH_jason_reseq

-0.31

-0.316

NO_jason_reseq

0.071

-0.331

B6_jason_reseq

-2.9

-0.917

MHCII_jason_reseq

-0.034

0.252

Isoniazid02

-0.192

0.01

Rifampicin4

-0.26

0.038

Ethambutol3

-0.161

0.268

Meropenem3

0.987

-0.214

Vancomycin16

0.57

0.233

Rv2680_day32

0.215

-0.178

H37Rv_KO_MarP

1.013

-0.025

hypoxia_3wks

-0.028

0.423

hypoxia_6wks

-0.635

0.877

glycerol

0.266

-0.753

cholesterol

-0.218

-0.834

AJ

-0.721

-0.057

Bibs02

-0.363

-0.527

Bibs02c

-0.246

-0.708

BL6

-0.075

-0.199

BL6a

0.156

-0.587

BXD01

-0.136

-0.245

BXD010

0.704

-0.511

BXD011

0.207

-0.337

BXD03

-0.15

0.135

BXD04

-0.606

-0.17

BXD05

0.669

-0.6

BXD06

0.061

-0.016

BXD07

0.131

-0.221

BXD08

-0.361

-0.067

BXD09

0.276

-0.295

CAST

-0.983

-0.015

CCcont

0.301

-0.105

DS01

-0.293

-0.074

DS02

0.384

-0.644

DS04

0.677

0.0

DS0c

0.519

0.616

GP01

-0.493

0.458

GP02

-0.081

-0.175

GP0c

-0.353

-0.284

NOD

2.301

0.552

NZO

-0.513

-0.543

PWK

-0.07

-0.442

H37Rv_KO_CtpC

-0.651

-0.269

H37Rv_KO_CtpD

-0.363

-0.306

H37Rv_KO_Rv1272

-0.067

-0.812

H37Rv_KO_SugABC

-0.972

-1.113

H37Rv_KO_MbtN

0.602

1.113

Trans05

-0.678

-0.032

macrophage_unactivated

0.603

0.325

IL1

-0.397

0.513

Rapamycin

-0.018

-0.276

Tcell

-0.505

-0.033

GMCSF

0.663

0.343

IFNab

1.119

-0.03

IFNg

0.569

0.834

IFNg_GMCSF1

0.493

0.295

Rv1432_day32

-0.415

-0.845

Rv1565c_day32

0.063

0.235

secA2_input

-0.598

-1.027

delta_Rv3594

-0.044

-0.58

delta_Rv3717

-0.313

-0.374

delta_Rv3811

0.164

-0.375

delta_Rv0954

-0.028

0.833

PonA1

-0.709

-0.493

EccD1_KO

0.299

-0.072

EspI_KO

0.374

-0.094

PE35_KO

0.289

0.543

PPE68_KO

0.189

0.307

glycerol2

0.258

0.479

lignocerate

0.588

0.342

oleate

0.413

0.495

phosphatidylcholine

0.471

0.552

acetate

-0.432

-0.042

glucAc

0.125

0.156

Rv0950ko

0.193

0.347

Rv1096ko

0.923

0.585

Rv3684ko

0.023

1.055

delta_otsA_trehalose

0.191

-1.395