TnSeqCorr

Top 10 genes with highest correlation to Rv0864/moaC2:

update plotcorrelationlink to info on gene
Rv3400/- (cc=0.4401) info on Rv3400/-
Rv3564/fadE33 (cc=0.3799) info on Rv3564/fadE33
Rv1687c/- (cc=0.3661) info on Rv1687c/-
Rv3639c/- (cc=0.3655) info on Rv3639c/-
Rv0498/- (cc=0.3611) info on Rv0498/-
Rv1256c/cyp130 (cc=0.3554) info on Rv1256c/cyp130
Rv2417c/- (cc=0.3511) info on Rv2417c/-
Rv2927c/- (cc=0.3498) info on Rv2927c/-
Rv0923c/- (cc=0.3408) info on Rv0923c/-
Rv3121/cyp141 (cc=0.3403) info on Rv3121/cyp141

Correlation of Rv0864/moaC2 with Rv3400/-

Normalized LFCs for Rv0864/moaC2:
(description and provenance of datasets)
Rv0864/moaC2Rv3400/-
Fe_supp_jason_reseq

0.128

-0.671

low_pH_jason_reseq

-0.31

-1.36

NO_jason_reseq

0.071

-1.339

B6_jason_reseq

-2.9

-2.938

MHCII_jason_reseq

-0.034

-2.903

Isoniazid02

-0.192

-1.478

Rifampicin4

-0.26

-0.36

Ethambutol3

-0.161

0.038

Meropenem3

0.987

-0.636

Vancomycin16

0.57

-1.409

Rv2680_day32

0.215

-1.829

H37Rv_KO_MarP

1.013

-0.254

hypoxia_3wks

-0.028

-1.049

hypoxia_6wks

-0.635

-2.021

glycerol

0.266

-1.706

cholesterol

-0.218

-0.947

AJ

-0.721

-5.607

Bibs02

-0.363

-3.776

Bibs02c

-0.246

-3.052

BL6

-0.075

-1.878

BL6a

0.156

-2.583

BXD01

-0.136

-2.014

BXD010

0.704

-0.889

BXD011

0.207

-1.301

BXD03

-0.15

-1.309

BXD04

-0.606

-1.613

BXD05

0.669

-2.35

BXD06

0.061

-0.873

BXD07

0.131

-1.806

BXD08

-0.361

-2.251

BXD09

0.276

-2.173

CAST

-0.983

-3.36

CCcont

0.301

0.382

DS01

-0.293

-4.878

DS02

0.384

-2.409

DS04

0.677

-1.731

DS0c

0.519

-4.04

GP01

-0.493

-2.386

GP02

-0.081

-2.011

GP0c

-0.353

-1.365

NOD

2.301

0.462

NZO

-0.513

-4.82

PWK

-0.07

-4.367

H37Rv_KO_CtpC

-0.651

-2.928

H37Rv_KO_CtpD

-0.363

-1.607

H37Rv_KO_Rv1272

-0.067

-1.48

H37Rv_KO_SugABC

-0.972

-1.158

H37Rv_KO_MbtN

0.602

-0.491

Trans05

-0.678

-1.408

macrophage_unactivated

0.603

-1.054

IL1

-0.397

-0.466

Rapamycin

-0.018

-1.36

Tcell

-0.505

-1.831

GMCSF

0.663

-0.444

IFNab

1.119

0.0

IFNg

0.569

-0.393

IFNg_GMCSF1

0.493

-0.729

Rv1432_day32

-0.415

-2.511

Rv1565c_day32

0.063

-3.45

secA2_input

-0.598

0.125

delta_Rv3594

-0.044

-0.35

delta_Rv3717

-0.313

-1.519

delta_Rv3811

0.164

-0.388

delta_Rv0954

-0.028

-0.698

PonA1

-0.709

-1.468

EccD1_KO

0.299

0.648

EspI_KO

0.374

0.322

PE35_KO

0.289

0.362

PPE68_KO

0.189

0.758

glycerol2

0.258

0.245

lignocerate

0.588

-0.377

oleate

0.413

1.483

phosphatidylcholine

0.471

0.515

acetate

-0.432

-1.051

glucAc

0.125

-1.415

Rv0950ko

0.193

-0.027

Rv1096ko

0.923

1.719

Rv3684ko

0.023

1.107

delta_otsA_trehalose

0.191

-0.012