Top 10 genes with highest correlation to Rv0861c/ercc3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1324/- | (cc=0.5465) | info on Rv1324/- |
| Rv2169c/- | (cc=0.5449) | info on Rv2169c/- |
| Rv1638/uvrA | (cc=0.5351) | info on Rv1638/uvrA |
| Rv2518c/ldtB | (cc=0.5333) | info on Rv2518c/ldtB |
| Rv2535c/pepQ | (cc=0.51) | info on Rv2535c/pepQ |
| Rv2179c/- | (cc=0.5092) | info on Rv2179c/- |
| Rv1432/- | (cc=0.5023) | info on Rv1432/- |
| Rv0150c/- | (cc=0.4831) | info on Rv0150c/- |
| Rv2700/- | (cc=0.4696) | info on Rv2700/- |
| Rv1298/rpmE | (cc=0.4657) | info on Rv1298/rpmE |
Correlation of Rv0861c/ercc3 with Rv2535c/pepQ
Normalized LFCs for Rv0861c/ercc3:
(description and provenance of datasets)
| Rv0861c/ercc3 | Rv2535c/pepQ | |
| Fe_supp_jason_reseq | 0.423 | 1.68 |
| low_pH_jason_reseq | -0.055 | -0.231 |
| NO_jason_reseq | 0.633 | -0.362 |
| B6_jason_reseq | -1.039 | -0.153 |
| MHCII_jason_reseq | 1.426 | -0.135 |
| Isoniazid02 | 0.419 | -2.369 |
| Rifampicin4 | -0.125 | -1.7 |
| Ethambutol3 | 0.551 | -0.278 |
| Meropenem3 | -0.386 | -1.801 |
| Vancomycin16 | 0.04 | -2.032 |
| Rv2680_day32 | 0.922 | -0.359 |
| H37Rv_KO_MarP | 0.025 | 0.7 |
| hypoxia_3wks | -0.471 | -0.55 |
| hypoxia_6wks | -0.658 | -0.288 |
| glycerol | 0.891 | 0.353 |
| cholesterol | 0.663 | 2.735 |
| AJ | 0.392 | -0.232 |
| Bibs02 | -1.142 | -0.183 |
| Bibs02c | -0.056 | -0.209 |
| BL6 | 0.343 | -0.125 |
| BL6a | 0.544 | -0.198 |
| BXD01 | 0.458 | -0.13 |
| BXD010 | 0.73 | -0.128 |
| BXD011 | 0.819 | 0.0 |
| BXD03 | 0.035 | -0.135 |
| BXD04 | 0.124 | -0.124 |
| BXD05 | 0.846 | 0.0 |
| BXD06 | 0.283 | -0.133 |
| BXD07 | 0.68 | -0.138 |
| BXD08 | 1.202 | -0.133 |
| BXD09 | 0.904 | -0.14 |
| CAST | 0.389 | -0.23 |
| CCcont | 0.607 | 2.128 |
| DS01 | 0.695 | -0.236 |
| DS02 | 0.414 | -0.217 |
| DS04 | 0.492 | 0.177 |
| DS0c | 0.46 | -0.217 |
| GP01 | -0.026 | -0.099 |
| GP02 | 1.011 | -0.083 |
| GP0c | 0.659 | 0.227 |
| NOD | -0.452 | -0.225 |
| NZO | 0.15 | -0.199 |
| PWK | 0.689 | -0.196 |
| H37Rv_KO_CtpC | 1.259 | 0.284 |
| H37Rv_KO_CtpD | 1.029 | 0.791 |
| H37Rv_KO_Rv1272 | 0.804 | 0.246 |
| H37Rv_KO_SugABC | 0.678 | 0.808 |
| H37Rv_KO_MbtN | 1.438 | 0.841 |
| Trans05 | 0.894 | -0.131 |
| macrophage_unactivated | 1.111 | 1.48 |
| IL1 | 0.899 | -0.341 |
| Rapamycin | 0.531 | 0.0 |
| Tcell | 1.069 | 0.349 |
| GMCSF | 0.734 | 0.283 |
| IFNab | 0.269 | 0.623 |
| IFNg | 0.676 | -0.307 |
| IFNg_GMCSF1 | 1.471 | 0.0 |
| Rv1432_day32 | -0.42 | -1.207 |
| Rv1565c_day32 | 1.461 | -0.218 |
| secA2_input | 0.448 | 2.052 |
| delta_Rv3594 | 1.054 | 2.022 |
| delta_Rv3717 | 1.516 | 0.736 |
| delta_Rv3811 | 1.304 | 1.41 |
| delta_Rv0954 | 1.027 | 1.081 |
| PonA1 | -0.338 | -0.402 |
| EccD1_KO | 0.73 | 1.891 |
| EspI_KO | 0.248 | 2.119 |
| PE35_KO | 1.706 | 1.846 |
| PPE68_KO | 1.609 | 2.377 |
| glycerol2 | -0.64 | -4.566 |
| lignocerate | -0.257 | -2.986 |
| oleate | -0.906 | -6.0 |
| phosphatidylcholine | -0.857 | -2.654 |
| acetate | -0.49 | 0.128 |
| glucAc | -0.328 | 0.453 |
| Rv0950ko | -1.167 | -1.095 |
| Rv1096ko | -0.908 | 0.0 |
| Rv3684ko | -0.527 | 0.105 |
| delta_otsA_trehalose | 0.122 | 0.906 |