Top 10 genes with highest correlation to Rv0861c/ercc3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1324/- | (cc=0.5465) | info on Rv1324/- |
| Rv2169c/- | (cc=0.5449) | info on Rv2169c/- |
| Rv1638/uvrA | (cc=0.5351) | info on Rv1638/uvrA |
| Rv2518c/ldtB | (cc=0.5333) | info on Rv2518c/ldtB |
| Rv2535c/pepQ | (cc=0.51) | info on Rv2535c/pepQ |
| Rv2179c/- | (cc=0.5092) | info on Rv2179c/- |
| Rv1432/- | (cc=0.5023) | info on Rv1432/- |
| Rv0150c/- | (cc=0.4831) | info on Rv0150c/- |
| Rv2700/- | (cc=0.4696) | info on Rv2700/- |
| Rv1298/rpmE | (cc=0.4657) | info on Rv1298/rpmE |
Correlation of Rv0861c/ercc3 with Rv0150c/-
Normalized LFCs for Rv0861c/ercc3:
(description and provenance of datasets)
| Rv0861c/ercc3 | Rv0150c/- | |
| Fe_supp_jason_reseq | 0.423 | -0.369 |
| low_pH_jason_reseq | -0.055 | -0.254 |
| NO_jason_reseq | 0.633 | 0.53 |
| B6_jason_reseq | -1.039 | -1.11 |
| MHCII_jason_reseq | 1.426 | -0.503 |
| Isoniazid02 | 0.419 | -0.749 |
| Rifampicin4 | -0.125 | -0.133 |
| Ethambutol3 | 0.551 | -1.216 |
| Meropenem3 | -0.386 | -0.981 |
| Vancomycin16 | 0.04 | -0.13 |
| Rv2680_day32 | 0.922 | 0.0 |
| H37Rv_KO_MarP | 0.025 | -0.162 |
| hypoxia_3wks | -0.471 | -0.989 |
| hypoxia_6wks | -0.658 | -0.614 |
| glycerol | 0.891 | 0.094 |
| cholesterol | 0.663 | 0.867 |
| AJ | 0.392 | 0.309 |
| Bibs02 | -1.142 | -1.507 |
| Bibs02c | -0.056 | -1.325 |
| BL6 | 0.343 | -1.031 |
| BL6a | 0.544 | 1.934 |
| BXD01 | 0.458 | 0.376 |
| BXD010 | 0.73 | -0.269 |
| BXD011 | 0.819 | 0.829 |
| BXD03 | 0.035 | 0.123 |
| BXD04 | 0.124 | 1.184 |
| BXD05 | 0.846 | 1.154 |
| BXD06 | 0.283 | 1.029 |
| BXD07 | 0.68 | 0.587 |
| BXD08 | 1.202 | 1.485 |
| BXD09 | 0.904 | 1.146 |
| CAST | 0.389 | -0.484 |
| CCcont | 0.607 | -1.231 |
| DS01 | 0.695 | 0.0 |
| DS02 | 0.414 | 0.38 |
| DS04 | 0.492 | -0.408 |
| DS0c | 0.46 | -1.571 |
| GP01 | -0.026 | 1.035 |
| GP02 | 1.011 | 0.0 |
| GP0c | 0.659 | 1.592 |
| NOD | -0.452 | -0.9 |
| NZO | 0.15 | -0.199 |
| PWK | 0.689 | -0.786 |
| H37Rv_KO_CtpC | 1.259 | 0.347 |
| H37Rv_KO_CtpD | 1.029 | -1.044 |
| H37Rv_KO_Rv1272 | 0.804 | -0.666 |
| H37Rv_KO_SugABC | 0.678 | -0.817 |
| H37Rv_KO_MbtN | 1.438 | -0.653 |
| Trans05 | 0.894 | 3.054 |
| macrophage_unactivated | 1.111 | 0.947 |
| IL1 | 0.899 | 1.02 |
| Rapamycin | 0.531 | -2.584 |
| Tcell | 1.069 | -1.118 |
| GMCSF | 0.734 | 0.671 |
| IFNab | 0.269 | 0.399 |
| IFNg | 0.676 | 1.2 |
| IFNg_GMCSF1 | 1.471 | 0.085 |
| Rv1432_day32 | -0.42 | 0.0 |
| Rv1565c_day32 | 1.461 | -0.665 |
| secA2_input | 0.448 | -1.476 |
| delta_Rv3594 | 1.054 | 3.009 |
| delta_Rv3717 | 1.516 | 3.934 |
| delta_Rv3811 | 1.304 | 3.069 |
| delta_Rv0954 | 1.027 | 4.343 |
| PonA1 | -0.338 | -0.159 |
| EccD1_KO | 0.73 | 1.924 |
| EspI_KO | 0.248 | 0.0 |
| PE35_KO | 1.706 | 0.589 |
| PPE68_KO | 1.609 | -0.237 |
| glycerol2 | -0.64 | -3.077 |
| lignocerate | -0.257 | -2.534 |
| oleate | -0.906 | -3.113 |
| phosphatidylcholine | -0.857 | -3.444 |
| acetate | -0.49 | -4.088 |
| glucAc | -0.328 | -2.542 |
| Rv0950ko | -1.167 | 0.289 |
| Rv1096ko | -0.908 | 0.561 |
| Rv3684ko | -0.527 | 0.314 |
| delta_otsA_trehalose | 0.122 | 0.0 |