Top 10 genes with highest correlation to Rv0859/fadA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0860/fadB | (cc=0.7582) | info on Rv0860/fadB |
| Rv0038/- | (cc=0.6275) | info on Rv0038/- |
| Rv0910/- | (cc=0.5789) | info on Rv0910/- |
| Rv3261/fbiA | (cc=0.5722) | info on Rv3261/fbiA |
| Rv0998/- | (cc=0.5721) | info on Rv0998/- |
| Rv0407/fgd1 | (cc=0.5585) | info on Rv0407/fgd1 |
| Rv0561c/- | (cc=0.5376) | info on Rv0561c/- |
| Rv1473/- | (cc=0.5331) | info on Rv1473/- |
| Rv0467/icl1 | (cc=0.5304) | info on Rv0467/icl1 |
| Rv1324/- | (cc=0.5121) | info on Rv1324/- |
Correlation of Rv0859/fadA with Rv0860/fadB
Normalized LFCs for Rv0859/fadA:
(description and provenance of datasets)
| Rv0859/fadA | Rv0860/fadB | |
| Fe_supp_jason_reseq | -0.688 | -0.38 |
| low_pH_jason_reseq | -0.877 | -0.403 |
| NO_jason_reseq | -2.793 | -0.302 |
| B6_jason_reseq | -1.334 | -0.421 |
| MHCII_jason_reseq | -0.512 | -0.37 |
| Isoniazid02 | 1.288 | 2.041 |
| Rifampicin4 | 0.157 | 0.712 |
| Ethambutol3 | 0.37 | 2.004 |
| Meropenem3 | -0.509 | 0.379 |
| Vancomycin16 | -0.499 | -0.175 |
| Rv2680_day32 | -0.554 | 0.0 |
| H37Rv_KO_MarP | -0.384 | 0.0 |
| hypoxia_3wks | 1.049 | 0.347 |
| hypoxia_6wks | -1.075 | -0.194 |
| glycerol | 2.817 | 1.647 |
| cholesterol | 2.515 | 1.468 |
| AJ | -0.751 | 0.0 |
| Bibs02 | -0.775 | 0.592 |
| Bibs02c | 0.629 | 0.0 |
| BL6 | -0.187 | -0.125 |
| BL6a | 0.973 | 0.181 |
| BXD01 | -0.552 | -0.13 |
| BXD010 | -0.543 | -0.128 |
| BXD011 | -0.412 | -0.127 |
| BXD03 | -0.573 | -0.135 |
| BXD04 | -0.524 | -0.124 |
| BXD05 | -0.314 | -0.135 |
| BXD06 | -0.311 | 0.0 |
| BXD07 | -0.323 | -0.138 |
| BXD08 | -0.431 | -0.133 |
| BXD09 | -0.328 | -0.14 |
| CAST | -0.344 | 0.0 |
| CCcont | 2.961 | 1.617 |
| DS01 | 2.421 | 2.123 |
| DS02 | 0.414 | 0.548 |
| DS04 | 1.938 | 0.883 |
| DS0c | 2.637 | 2.349 |
| GP01 | -0.418 | -0.099 |
| GP02 | -0.353 | -0.083 |
| GP0c | -0.551 | -0.13 |
| NOD | -0.335 | 0.205 |
| NZO | -0.845 | -0.199 |
| PWK | -0.635 | -0.196 |
| H37Rv_KO_CtpC | -0.526 | 0.148 |
| H37Rv_KO_CtpD | 0.0 | 0.0 |
| H37Rv_KO_Rv1272 | -0.102 | 0.0 |
| H37Rv_KO_SugABC | 0.817 | 0.509 |
| H37Rv_KO_MbtN | 0.362 | 1.335 |
| Trans05 | -0.423 | -0.131 |
| macrophage_unactivated | 0.915 | 0.65 |
| IL1 | -1.077 | -0.341 |
| Rapamycin | -1.114 | -0.353 |
| Tcell | -1.183 | 0.0 |
| GMCSF | -0.449 | 0.283 |
| IFNab | -0.514 | -0.348 |
| IFNg | -0.703 | -0.644 |
| IFNg_GMCSF1 | -1.141 | -0.757 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -0.559 | 0.415 |
| secA2_input | 0.878 | -0.429 |
| delta_Rv3594 | 2.896 | 1.297 |
| delta_Rv3717 | 0.165 | 0.0 |
| delta_Rv3811 | 2.391 | 1.181 |
| delta_Rv0954 | 3.509 | 1.875 |
| PonA1 | 0.223 | -0.238 |
| EccD1_KO | 0.395 | 0.168 |
| EspI_KO | 1.609 | 1.146 |
| PE35_KO | 1.324 | 1.059 |
| PPE68_KO | 1.805 | 0.32 |
| glycerol2 | 0.528 | -0.914 |
| lignocerate | -0.666 | -1.218 |
| oleate | -3.56 | -2.836 |
| phosphatidylcholine | -0.265 | -1.311 |
| acetate | 2.937 | -0.482 |
| glucAc | 1.171 | -0.18 |
| Rv0950ko | -2.237 | -1.936 |
| Rv1096ko | -3.372 | -1.764 |
| Rv3684ko | -1.985 | -1.241 |
| delta_otsA_trehalose | -0.39 | -1.883 |