Top 10 genes with highest correlation to Rv0856/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1192/- | (cc=0.6024) | info on Rv1192/- |
| Rv3612c/- | (cc=0.5422) | info on Rv3612c/- |
| Rv0071/- | (cc=0.5323) | info on Rv0071/- |
| Rv3641c/fic | (cc=0.5232) | info on Rv3641c/fic |
| Rv1442/bisC | (cc=0.5172) | info on Rv1442/bisC |
| Rv2351c/plcA | (cc=0.5127) | info on Rv2351c/plcA |
| Rv0470A/- | (cc=0.4959) | info on Rv0470A/- |
| Rv3450c/eccB4 | (cc=0.4783) | info on Rv3450c/eccB4 |
| Rv1425/- | (cc=0.4773) | info on Rv1425/- |
| Rv2636/- | (cc=0.4731) | info on Rv2636/- |
Correlation of Rv0856/- with Rv0071/-
Normalized LFCs for Rv0856/-:
(description and provenance of datasets)
| Rv0856/- | Rv0071/- | |
| Fe_supp_jason_reseq | 0.164 | 0.624 |
| low_pH_jason_reseq | -1.101 | -0.139 |
| NO_jason_reseq | 0.36 | 0.517 |
| B6_jason_reseq | 1.293 | 1.764 |
| MHCII_jason_reseq | 1.294 | 1.675 |
| Isoniazid02 | 0.143 | 0.073 |
| Rifampicin4 | 0.125 | 0.75 |
| Ethambutol3 | 0.308 | 1.131 |
| Meropenem3 | 1.494 | 0.694 |
| Vancomycin16 | 0.292 | 0.218 |
| Rv2680_day32 | 1.563 | 1.537 |
| H37Rv_KO_MarP | 0.078 | 0.059 |
| hypoxia_3wks | -0.706 | -0.152 |
| hypoxia_6wks | -0.37 | -0.182 |
| glycerol | -0.892 | 1.16 |
| cholesterol | 0.109 | 1.207 |
| AJ | 0.35 | -0.504 |
| Bibs02 | 0.24 | 0.474 |
| Bibs02c | 0.333 | 0.887 |
| BL6 | -1.052 | 0.441 |
| BL6a | -0.26 | -0.265 |
| BXD01 | -0.519 | -0.919 |
| BXD010 | -1.783 | -0.781 |
| BXD011 | 1.228 | -0.745 |
| BXD03 | 0.372 | -1.044 |
| BXD04 | -0.291 | -0.664 |
| BXD05 | -0.137 | -0.091 |
| BXD06 | -0.916 | -0.636 |
| BXD07 | -0.985 | -0.722 |
| BXD08 | -0.698 | -0.8 |
| BXD09 | -0.947 | -0.69 |
| CAST | 0.911 | 0.235 |
| CCcont | -0.807 | -0.342 |
| DS01 | -0.2 | 0.301 |
| DS02 | 0.469 | 0.767 |
| DS04 | 1.179 | 0.51 |
| DS0c | 1.222 | -0.093 |
| GP01 | 0.336 | -2.601 |
| GP02 | -1.08 | -2.703 |
| GP0c | -0.844 | -1.661 |
| NOD | 1.744 | 1.694 |
| NZO | 0.458 | 0.027 |
| PWK | 0.212 | 0.443 |
| H37Rv_KO_CtpC | -0.166 | 0.0 |
| H37Rv_KO_CtpD | 0.267 | 0.247 |
| H37Rv_KO_Rv1272 | -0.509 | -0.757 |
| H37Rv_KO_SugABC | -0.833 | -0.655 |
| H37Rv_KO_MbtN | -0.753 | -0.546 |
| Trans05 | -0.864 | -0.911 |
| macrophage_unactivated | 0.246 | 0.085 |
| IL1 | 0.353 | 0.181 |
| Rapamycin | -1.12 | 0.779 |
| Tcell | -0.072 | -0.088 |
| GMCSF | 0.187 | 0.671 |
| IFNab | -0.393 | -0.366 |
| IFNg | -0.874 | -0.171 |
| IFNg_GMCSF1 | 0.76 | 0.776 |
| Rv1432_day32 | -1.688 | 0.426 |
| Rv1565c_day32 | 1.267 | 1.978 |
| secA2_input | 0.476 | 1.85 |
| delta_Rv3594 | -1.124 | -0.136 |
| delta_Rv3717 | -0.529 | -0.409 |
| delta_Rv3811 | -0.775 | -0.201 |
| delta_Rv0954 | 0.0 | 0.828 |
| PonA1 | -0.387 | 0.177 |
| EccD1_KO | -1.894 | -1.727 |
| EspI_KO | -0.739 | -1.931 |
| PE35_KO | -1.397 | -1.248 |
| PPE68_KO | -1.168 | -1.017 |
| glycerol2 | 0.921 | 0.422 |
| lignocerate | 1.406 | 0.559 |
| oleate | 0.417 | -0.903 |
| phosphatidylcholine | 1.224 | 0.172 |
| acetate | 0.931 | 0.321 |
| glucAc | 0.897 | 0.587 |
| Rv0950ko | -0.19 | 0.066 |
| Rv1096ko | -1.267 | 0.709 |
| Rv3684ko | -0.498 | -0.072 |
| delta_otsA_trehalose | 0.136 | 1.156 |