Top 10 genes with highest correlation to Rv0856/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1192/- | (cc=0.6024) | info on Rv1192/- |
| Rv3612c/- | (cc=0.5422) | info on Rv3612c/- |
| Rv0071/- | (cc=0.5323) | info on Rv0071/- |
| Rv3641c/fic | (cc=0.5232) | info on Rv3641c/fic |
| Rv1442/bisC | (cc=0.5172) | info on Rv1442/bisC |
| Rv2351c/plcA | (cc=0.5127) | info on Rv2351c/plcA |
| Rv0470A/- | (cc=0.4959) | info on Rv0470A/- |
| Rv3450c/eccB4 | (cc=0.4783) | info on Rv3450c/eccB4 |
| Rv1425/- | (cc=0.4773) | info on Rv1425/- |
| Rv2636/- | (cc=0.4731) | info on Rv2636/- |
Correlation of Rv0856/- with Rv1192/-
Normalized LFCs for Rv0856/-:
(description and provenance of datasets)
| Rv0856/- | Rv1192/- | |
| Fe_supp_jason_reseq | 0.164 | 1.031 |
| low_pH_jason_reseq | -1.101 | -1.225 |
| NO_jason_reseq | 0.36 | -0.189 |
| B6_jason_reseq | 1.293 | 1.83 |
| MHCII_jason_reseq | 1.294 | 1.815 |
| Isoniazid02 | 0.143 | 0.377 |
| Rifampicin4 | 0.125 | -0.125 |
| Ethambutol3 | 0.308 | 1.46 |
| Meropenem3 | 1.494 | 1.205 |
| Vancomycin16 | 0.292 | 0.119 |
| Rv2680_day32 | 1.563 | 1.037 |
| H37Rv_KO_MarP | 0.078 | 0.203 |
| hypoxia_3wks | -0.706 | -0.861 |
| hypoxia_6wks | -0.37 | -1.207 |
| glycerol | -0.892 | -1.119 |
| cholesterol | 0.109 | -0.023 |
| AJ | 0.35 | 0.266 |
| Bibs02 | 0.24 | 0.485 |
| Bibs02c | 0.333 | 0.377 |
| BL6 | -1.052 | -0.701 |
| BL6a | -0.26 | -0.218 |
| BXD01 | -0.519 | -0.434 |
| BXD010 | -1.783 | -1.013 |
| BXD011 | 1.228 | -0.527 |
| BXD03 | 0.372 | -0.481 |
| BXD04 | -0.291 | -0.115 |
| BXD05 | -0.137 | -1.431 |
| BXD06 | -0.916 | -0.467 |
| BXD07 | -0.985 | -0.623 |
| BXD08 | -0.698 | -0.793 |
| BXD09 | -0.947 | -0.899 |
| CAST | 0.911 | 0.469 |
| CCcont | -0.807 | -0.592 |
| DS01 | -0.2 | 1.167 |
| DS02 | 0.469 | 0.429 |
| DS04 | 1.179 | 1.526 |
| DS0c | 1.222 | 0.947 |
| GP01 | 0.336 | -0.602 |
| GP02 | -1.08 | 0.033 |
| GP0c | -0.844 | -1.353 |
| NOD | 1.744 | 0.731 |
| NZO | 0.458 | 0.025 |
| PWK | 0.212 | 0.374 |
| H37Rv_KO_CtpC | -0.166 | -0.644 |
| H37Rv_KO_CtpD | 0.267 | -0.502 |
| H37Rv_KO_Rv1272 | -0.509 | -0.653 |
| H37Rv_KO_SugABC | -0.833 | -0.293 |
| H37Rv_KO_MbtN | -0.753 | -1.325 |
| Trans05 | -0.864 | -0.495 |
| macrophage_unactivated | 0.246 | 0.092 |
| IL1 | 0.353 | -0.329 |
| Rapamycin | -1.12 | -1.04 |
| Tcell | -0.072 | 0.248 |
| GMCSF | 0.187 | -0.465 |
| IFNab | -0.393 | -0.305 |
| IFNg | -0.874 | -0.81 |
| IFNg_GMCSF1 | 0.76 | -0.418 |
| Rv1432_day32 | -1.688 | -0.92 |
| Rv1565c_day32 | 1.267 | -0.573 |
| secA2_input | 0.476 | -0.177 |
| delta_Rv3594 | -1.124 | 0.659 |
| delta_Rv3717 | -0.529 | 0.02 |
| delta_Rv3811 | -0.775 | 0.946 |
| delta_Rv0954 | 0.0 | 1.187 |
| PonA1 | -0.387 | 0.372 |
| EccD1_KO | -1.894 | -0.957 |
| EspI_KO | -0.739 | -0.2 |
| PE35_KO | -1.397 | -0.277 |
| PPE68_KO | -1.168 | -0.035 |
| glycerol2 | 0.921 | 0.935 |
| lignocerate | 1.406 | 1.103 |
| oleate | 0.417 | 0.669 |
| phosphatidylcholine | 1.224 | 1.139 |
| acetate | 0.931 | 0.618 |
| glucAc | 0.897 | 0.666 |
| Rv0950ko | -0.19 | 0.648 |
| Rv1096ko | -1.267 | 0.682 |
| Rv3684ko | -0.498 | 0.383 |
| delta_otsA_trehalose | 0.136 | -0.476 |