Top 10 genes with highest correlation to Rv0833/PE_PGRS13:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1091/PE_PGRS22 | (cc=0.714) | info on Rv1091/PE_PGRS22 |
| Rv3380c/- | (cc=0.7086) | info on Rv3380c/- |
| Rv2814c/- | (cc=0.6666) | info on Rv2814c/- |
| Rv1087/PE_PGRS21 | (cc=0.6646) | info on Rv1087/PE_PGRS21 |
| Rv3345c/PE_PGRS50 | (cc=0.6635) | info on Rv3345c/PE_PGRS50 |
| Rv2479c/- | (cc=0.6632) | info on Rv2479c/- |
| Rv1764/- | (cc=0.6587) | info on Rv1764/- |
| Rv2106/- | (cc=0.6564) | info on Rv2106/- |
| Rv2648/- | (cc=0.6554) | info on Rv2648/- |
| Rv3512/PE_PGRS56 | (cc=0.6545) | info on Rv3512/PE_PGRS56 |
Correlation of Rv0833/PE_PGRS13 with Rv2814c/-
Normalized LFCs for Rv0833/PE_PGRS13:
(description and provenance of datasets)
| Rv0833/PE_PGRS13 | Rv2814c/- | |
| Fe_supp_jason_reseq | -0.923 | -0.491 |
| low_pH_jason_reseq | -0.284 | -0.601 |
| NO_jason_reseq | 0.205 | 0.0 |
| B6_jason_reseq | -0.52 | -0.74 |
| MHCII_jason_reseq | -0.694 | -0.237 |
| Isoniazid02 | 0.469 | -0.113 |
| Rifampicin4 | 0.872 | 0.988 |
| Ethambutol3 | 0.27 | 0.514 |
| Meropenem3 | 0.0 | -0.379 |
| Vancomycin16 | 0.589 | -0.05 |
| Rv2680_day32 | -0.082 | 0.171 |
| H37Rv_KO_MarP | -0.525 | -0.294 |
| hypoxia_3wks | 0.706 | 0.538 |
| hypoxia_6wks | -0.274 | -0.017 |
| glycerol | 0.686 | -0.417 |
| cholesterol | 0.574 | 0.296 |
| AJ | 1.771 | 1.55 |
| Bibs02 | 0.621 | 1.378 |
| Bibs02c | 1.678 | 1.841 |
| BL6 | -0.104 | 0.382 |
| BL6a | 0.993 | 1.155 |
| BXD01 | 0.101 | 0.778 |
| BXD010 | 0.928 | 1.0 |
| BXD011 | 0.0 | 1.002 |
| BXD03 | 1.084 | 0.992 |
| BXD04 | 0.793 | 0.707 |
| BXD05 | 0.377 | 1.173 |
| BXD06 | 0.199 | 0.66 |
| BXD07 | 0.301 | 0.935 |
| BXD08 | 0.452 | 0.684 |
| BXD09 | 0.305 | 0.85 |
| CAST | 0.782 | 1.532 |
| CCcont | -0.124 | 0.368 |
| DS01 | -0.412 | 1.1 |
| DS02 | 0.0 | 1.076 |
| DS04 | 0.0 | 1.367 |
| DS0c | -0.379 | 1.336 |
| GP01 | 1.185 | 1.378 |
| GP02 | 2.978 | 1.49 |
| GP0c | 1.594 | 0.975 |
| NOD | 1.884 | 1.591 |
| NZO | 0.298 | 1.292 |
| PWK | 0.426 | 1.421 |
| H37Rv_KO_CtpC | 0.353 | 0.971 |
| H37Rv_KO_CtpD | 0.635 | 1.046 |
| H37Rv_KO_Rv1272 | 0.479 | 0.68 |
| H37Rv_KO_SugABC | -0.272 | 0.901 |
| H37Rv_KO_MbtN | -0.283 | 0.744 |
| Trans05 | 0.588 | 1.044 |
| macrophage_unactivated | -0.783 | -0.991 |
| IL1 | -1.967 | -0.575 |
| Rapamycin | -1.679 | -0.988 |
| Tcell | -1.782 | -2.05 |
| GMCSF | -0.422 | -0.552 |
| IFNab | -2.382 | -1.206 |
| IFNg | -0.911 | -0.951 |
| IFNg_GMCSF1 | -1.071 | -0.682 |
| Rv1432_day32 | 0.661 | 0.484 |
| Rv1565c_day32 | -1.054 | 0.095 |
| secA2_input | -0.861 | 0.161 |
| delta_Rv3594 | 0.0 | -0.167 |
| delta_Rv3717 | -0.508 | -0.247 |
| delta_Rv3811 | -0.149 | -0.219 |
| delta_Rv0954 | -1.333 | 0.432 |
| PonA1 | 0.451 | -0.01 |
| EccD1_KO | 0.49 | -0.026 |
| EspI_KO | 0.26 | 1.038 |
| PE35_KO | -0.283 | 0.543 |
| PPE68_KO | -0.205 | 0.307 |
| glycerol2 | -0.392 | -1.08 |
| lignocerate | -0.613 | -0.704 |
| oleate | -0.397 | -1.253 |
| phosphatidylcholine | -0.253 | -0.964 |
| acetate | 0.507 | 0.105 |
| glucAc | 0.165 | 0.086 |
| Rv0950ko | 0.621 | -0.109 |
| Rv1096ko | 1.08 | -0.133 |
| Rv3684ko | 0.462 | -0.842 |
| delta_otsA_trehalose | 0.0 | 0.219 |