Top 10 genes with highest correlation to Rv0833/PE_PGRS13:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1091/PE_PGRS22 | (cc=0.714) | info on Rv1091/PE_PGRS22 |
| Rv3380c/- | (cc=0.7086) | info on Rv3380c/- |
| Rv2814c/- | (cc=0.6666) | info on Rv2814c/- |
| Rv1087/PE_PGRS21 | (cc=0.6646) | info on Rv1087/PE_PGRS21 |
| Rv3345c/PE_PGRS50 | (cc=0.6635) | info on Rv3345c/PE_PGRS50 |
| Rv2479c/- | (cc=0.6632) | info on Rv2479c/- |
| Rv1764/- | (cc=0.6587) | info on Rv1764/- |
| Rv2106/- | (cc=0.6564) | info on Rv2106/- |
| Rv2648/- | (cc=0.6554) | info on Rv2648/- |
| Rv3512/PE_PGRS56 | (cc=0.6545) | info on Rv3512/PE_PGRS56 |
Correlation of Rv0833/PE_PGRS13 with Rv2648/-
Normalized LFCs for Rv0833/PE_PGRS13:
(description and provenance of datasets)
| Rv0833/PE_PGRS13 | Rv2648/- | |
| Fe_supp_jason_reseq | -0.923 | -0.197 |
| low_pH_jason_reseq | -0.284 | 0.607 |
| NO_jason_reseq | 0.205 | 0.213 |
| B6_jason_reseq | -0.52 | -0.291 |
| MHCII_jason_reseq | -0.694 | -0.668 |
| Isoniazid02 | 0.469 | 0.09 |
| Rifampicin4 | 0.872 | 0.831 |
| Ethambutol3 | 0.27 | 1.212 |
| Meropenem3 | 0.0 | -0.32 |
| Vancomycin16 | 0.589 | 0.0 |
| Rv2680_day32 | -0.082 | 0.0 |
| H37Rv_KO_MarP | -0.525 | -0.381 |
| hypoxia_3wks | 0.706 | 0.71 |
| hypoxia_6wks | -0.274 | -0.04 |
| glycerol | 0.686 | -0.478 |
| cholesterol | 0.574 | 0.036 |
| AJ | 1.771 | 1.686 |
| Bibs02 | 0.621 | -0.102 |
| Bibs02c | 1.678 | 1.27 |
| BL6 | -0.104 | -0.063 |
| BL6a | 0.993 | 0.641 |
| BXD01 | 0.101 | 0.273 |
| BXD010 | 0.928 | 0.491 |
| BXD011 | 0.0 | 0.209 |
| BXD03 | 1.084 | 0.413 |
| BXD04 | 0.793 | 0.213 |
| BXD05 | 0.377 | 0.829 |
| BXD06 | 0.199 | 0.47 |
| BXD07 | 0.301 | 0.29 |
| BXD08 | 0.452 | 0.246 |
| BXD09 | 0.305 | 0.248 |
| CAST | 0.782 | 0.968 |
| CCcont | -0.124 | -0.091 |
| DS01 | -0.412 | 0.578 |
| DS02 | 0.0 | 0.498 |
| DS04 | 0.0 | 0.326 |
| DS0c | -0.379 | 1.023 |
| GP01 | 1.185 | 1.148 |
| GP02 | 2.978 | 1.606 |
| GP0c | 1.594 | 0.498 |
| NOD | 1.884 | 0.967 |
| NZO | 0.298 | 1.4 |
| PWK | 0.426 | 1.483 |
| H37Rv_KO_CtpC | 0.353 | 1.152 |
| H37Rv_KO_CtpD | 0.635 | 0.378 |
| H37Rv_KO_Rv1272 | 0.479 | 0.616 |
| H37Rv_KO_SugABC | -0.272 | 0.601 |
| H37Rv_KO_MbtN | -0.283 | 1.198 |
| Trans05 | 0.588 | 0.54 |
| macrophage_unactivated | -0.783 | -0.489 |
| IL1 | -1.967 | -1.278 |
| Rapamycin | -1.679 | -0.936 |
| Tcell | -1.782 | -1.655 |
| GMCSF | -0.422 | -1.505 |
| IFNab | -2.382 | -0.723 |
| IFNg | -0.911 | -1.045 |
| IFNg_GMCSF1 | -1.071 | -0.38 |
| Rv1432_day32 | 0.661 | 1.459 |
| Rv1565c_day32 | -1.054 | -0.875 |
| secA2_input | -0.861 | -0.204 |
| delta_Rv3594 | 0.0 | 0.145 |
| delta_Rv3717 | -0.508 | -0.493 |
| delta_Rv3811 | -0.149 | -0.425 |
| delta_Rv0954 | -1.333 | 0.0 |
| PonA1 | 0.451 | -0.574 |
| EccD1_KO | 0.49 | 0.092 |
| EspI_KO | 0.26 | 0.938 |
| PE35_KO | -0.283 | 0.828 |
| PPE68_KO | -0.205 | 0.218 |
| glycerol2 | -0.392 | 0.168 |
| lignocerate | -0.613 | -0.222 |
| oleate | -0.397 | -0.116 |
| phosphatidylcholine | -0.253 | -0.041 |
| acetate | 0.507 | 0.716 |
| glucAc | 0.165 | 1.706 |
| Rv0950ko | 0.621 | 0.127 |
| Rv1096ko | 1.08 | -0.066 |
| Rv3684ko | 0.462 | -0.364 |
| delta_otsA_trehalose | 0.0 | 0.58 |