Top 10 genes with highest correlation to Rv0829/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0349/- | (cc=0.579) | info on Rv0349/- |
| Rv0346c/ansP2 | (cc=0.5548) | info on Rv0346c/ansP2 |
| Rv0571c/- | (cc=0.5481) | info on Rv0571c/- |
| Rv1043c/- | (cc=0.5391) | info on Rv1043c/- |
| Rv1103c/mazE3 | (cc=0.5233) | info on Rv1103c/mazE3 |
| Rv1538c/ansA | (cc=0.517) | info on Rv1538c/ansA |
| Rv2082/- | (cc=0.5162) | info on Rv2082/- |
| Rv1212c/glgA | (cc=0.5082) | info on Rv1212c/glgA |
| Rv1865c/- | (cc=0.4997) | info on Rv1865c/- |
| Rv1961/- | (cc=0.4921) | info on Rv1961/- |
Correlation of Rv0829/- with Rv1961/-
Normalized LFCs for Rv0829/-:
(description and provenance of datasets)
| Rv0829/- | Rv1961/- | |
| Fe_supp_jason_reseq | -1.781 | -2.406 |
| low_pH_jason_reseq | -1.298 | -2.08 |
| NO_jason_reseq | 0.362 | 0.184 |
| B6_jason_reseq | -0.678 | -1.989 |
| MHCII_jason_reseq | -0.448 | -1.677 |
| Isoniazid02 | 0.154 | 0.236 |
| Rifampicin4 | -0.328 | -0.06 |
| Ethambutol3 | 0.315 | -0.407 |
| Meropenem3 | 0.246 | -0.386 |
| Vancomycin16 | -0.801 | -0.114 |
| Rv2680_day32 | -0.548 | -1.231 |
| H37Rv_KO_MarP | 0.308 | -0.188 |
| hypoxia_3wks | 0.251 | -0.929 |
| hypoxia_6wks | -0.257 | -0.411 |
| glycerol | -2.313 | 0.13 |
| cholesterol | -1.522 | -0.233 |
| AJ | 0.378 | 0.533 |
| Bibs02 | 0.717 | 0.242 |
| Bibs02c | -0.349 | -0.399 |
| BL6 | 0.106 | 0.758 |
| BL6a | -0.066 | -0.118 |
| BXD01 | -0.089 | -0.901 |
| BXD010 | -0.213 | -0.906 |
| BXD011 | -0.465 | -0.524 |
| BXD03 | 0.108 | -0.369 |
| BXD04 | -0.966 | -0.494 |
| BXD05 | 0.53 | 0.076 |
| BXD06 | -0.119 | -0.241 |
| BXD07 | -0.357 | 0.272 |
| BXD08 | -0.571 | 0.156 |
| BXD09 | -0.372 | -0.147 |
| CAST | 0.093 | 0.287 |
| CCcont | 0.025 | -0.33 |
| DS01 | 0.477 | 0.527 |
| DS02 | -0.889 | 0.158 |
| DS04 | 0.999 | 0.843 |
| DS0c | -0.2 | -0.789 |
| GP01 | -0.368 | 0.532 |
| GP02 | 0.967 | 1.445 |
| GP0c | -0.569 | 1.337 |
| NOD | -0.441 | -0.496 |
| NZO | 0.564 | 0.92 |
| PWK | 0.939 | -1.091 |
| H37Rv_KO_CtpC | -0.115 | 0.04 |
| H37Rv_KO_CtpD | -0.24 | -0.241 |
| H37Rv_KO_Rv1272 | -0.338 | -0.254 |
| H37Rv_KO_SugABC | 0.738 | 0.123 |
| H37Rv_KO_MbtN | -0.499 | -0.052 |
| Trans05 | -0.074 | -0.223 |
| macrophage_unactivated | -0.243 | -1.225 |
| IL1 | -0.217 | -0.219 |
| Rapamycin | -0.589 | 0.031 |
| Tcell | 0.134 | -0.277 |
| GMCSF | 0.304 | 0.264 |
| IFNab | -0.354 | 0.184 |
| IFNg | -0.051 | -0.377 |
| IFNg_GMCSF1 | 0.449 | 0.063 |
| Rv1432_day32 | 1.229 | 0.331 |
| Rv1565c_day32 | 0.0 | -0.595 |
| secA2_input | -0.089 | 0.13 |
| delta_Rv3594 | 1.649 | 0.171 |
| delta_Rv3717 | 1.836 | 0.858 |
| delta_Rv3811 | 2.104 | 1.316 |
| delta_Rv0954 | 1.512 | 0.51 |
| PonA1 | 0.794 | -0.609 |
| EccD1_KO | 0.411 | -0.158 |
| EspI_KO | 0.633 | -0.511 |
| PE35_KO | 0.12 | -0.618 |
| PPE68_KO | 0.339 | -0.154 |
| glycerol2 | 0.933 | -0.118 |
| lignocerate | 1.142 | 0.587 |
| oleate | 0.216 | -1.456 |
| phosphatidylcholine | 1.0 | 0.182 |
| acetate | 0.673 | 1.076 |
| glucAc | 1.027 | 1.194 |
| Rv0950ko | 0.16 | 0.917 |
| Rv1096ko | 1.948 | 0.66 |
| Rv3684ko | 0.079 | 0.357 |
| delta_otsA_trehalose | -0.385 | -0.152 |