Top 10 genes with highest correlation to Rv0829/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0349/- | (cc=0.579) | info on Rv0349/- |
| Rv0346c/ansP2 | (cc=0.5548) | info on Rv0346c/ansP2 |
| Rv0571c/- | (cc=0.5481) | info on Rv0571c/- |
| Rv1043c/- | (cc=0.5391) | info on Rv1043c/- |
| Rv1103c/mazE3 | (cc=0.5233) | info on Rv1103c/mazE3 |
| Rv1538c/ansA | (cc=0.517) | info on Rv1538c/ansA |
| Rv2082/- | (cc=0.5162) | info on Rv2082/- |
| Rv1212c/glgA | (cc=0.5082) | info on Rv1212c/glgA |
| Rv1865c/- | (cc=0.4997) | info on Rv1865c/- |
| Rv1961/- | (cc=0.4921) | info on Rv1961/- |
Correlation of Rv0829/- with Rv1538c/ansA
Normalized LFCs for Rv0829/-:
(description and provenance of datasets)
| Rv0829/- | Rv1538c/ansA | |
| Fe_supp_jason_reseq | -1.781 | -0.957 |
| low_pH_jason_reseq | -1.298 | -1.168 |
| NO_jason_reseq | 0.362 | 0.032 |
| B6_jason_reseq | -0.678 | -3.362 |
| MHCII_jason_reseq | -0.448 | -2.132 |
| Isoniazid02 | 0.154 | -1.713 |
| Rifampicin4 | -0.328 | -0.376 |
| Ethambutol3 | 0.315 | 1.36 |
| Meropenem3 | 0.246 | -0.527 |
| Vancomycin16 | -0.801 | -1.048 |
| Rv2680_day32 | -0.548 | -2.826 |
| H37Rv_KO_MarP | 0.308 | 0.563 |
| hypoxia_3wks | 0.251 | -2.265 |
| hypoxia_6wks | -0.257 | -3.168 |
| glycerol | -2.313 | -6.0 |
| cholesterol | -1.522 | -4.849 |
| AJ | 0.378 | -1.249 |
| Bibs02 | 0.717 | -0.629 |
| Bibs02c | -0.349 | -2.035 |
| BL6 | 0.106 | -2.408 |
| BL6a | -0.066 | -2.175 |
| BXD01 | -0.089 | -2.777 |
| BXD010 | -0.213 | -1.114 |
| BXD011 | -0.465 | -1.772 |
| BXD03 | 0.108 | -1.642 |
| BXD04 | -0.966 | -1.484 |
| BXD05 | 0.53 | -2.133 |
| BXD06 | -0.119 | -2.195 |
| BXD07 | -0.357 | -2.365 |
| BXD08 | -0.571 | -1.893 |
| BXD09 | -0.372 | -2.024 |
| CAST | 0.093 | -1.445 |
| CCcont | 0.025 | -0.741 |
| DS01 | 0.477 | -2.324 |
| DS02 | -0.889 | -1.314 |
| DS04 | 0.999 | -3.49 |
| DS0c | -0.2 | -2.305 |
| GP01 | -0.368 | -1.708 |
| GP02 | 0.967 | -2.324 |
| GP0c | -0.569 | -2.138 |
| NOD | -0.441 | -1.131 |
| NZO | 0.564 | -1.962 |
| PWK | 0.939 | -1.027 |
| H37Rv_KO_CtpC | -0.115 | -1.824 |
| H37Rv_KO_CtpD | -0.24 | -1.331 |
| H37Rv_KO_Rv1272 | -0.338 | -2.605 |
| H37Rv_KO_SugABC | 0.738 | -1.394 |
| H37Rv_KO_MbtN | -0.499 | -1.451 |
| Trans05 | -0.074 | -2.35 |
| macrophage_unactivated | -0.243 | -1.424 |
| IL1 | -0.217 | -1.444 |
| Rapamycin | -0.589 | -1.203 |
| Tcell | 0.134 | 0.593 |
| GMCSF | 0.304 | -1.885 |
| IFNab | -0.354 | -1.944 |
| IFNg | -0.051 | -1.831 |
| IFNg_GMCSF1 | 0.449 | -1.125 |
| Rv1432_day32 | 1.229 | -2.924 |
| Rv1565c_day32 | 0.0 | -2.281 |
| secA2_input | -0.089 | 1.058 |
| delta_Rv3594 | 1.649 | 0.389 |
| delta_Rv3717 | 1.836 | -0.283 |
| delta_Rv3811 | 2.104 | 0.4 |
| delta_Rv0954 | 1.512 | 1.304 |
| PonA1 | 0.794 | 0.906 |
| EccD1_KO | 0.411 | -0.76 |
| EspI_KO | 0.633 | -1.32 |
| PE35_KO | 0.12 | -0.12 |
| PPE68_KO | 0.339 | -0.371 |
| glycerol2 | 0.933 | 0.161 |
| lignocerate | 1.142 | -0.32 |
| oleate | 0.216 | -0.373 |
| phosphatidylcholine | 1.0 | -0.368 |
| acetate | 0.673 | -0.437 |
| glucAc | 1.027 | -0.272 |
| Rv0950ko | 0.16 | 0.374 |
| Rv1096ko | 1.948 | 0.757 |
| Rv3684ko | 0.079 | 0.619 |
| delta_otsA_trehalose | -0.385 | -0.694 |