TnSeqCorr

Top 10 genes with highest correlation to Rv0750/-:

update plotcorrelationlink to info on gene
Rv1806/PE20 (cc=0.4695) info on Rv1806/PE20
Rv0781/ptrBa (cc=0.45) info on Rv0781/ptrBa
Rv0170/mce1B (cc=0.4062) info on Rv0170/mce1B
Rv3303c/lpdA (cc=0.3933) info on Rv3303c/lpdA
Rv1494/mazE4 (cc=0.3831) info on Rv1494/mazE4
Rv2347c/esxP (cc=0.3811) info on Rv2347c/esxP
Rv0168/yrbE1B (cc=0.3749) info on Rv0168/yrbE1B
Rv1149/- (cc=0.3706) info on Rv1149/-
Rv1026/- (cc=0.3692) info on Rv1026/-
Rv2285/- (cc=0.3665) info on Rv2285/-

Correlation of Rv0750/- with Rv1026/-

Normalized LFCs for Rv0750/-:
(description and provenance of datasets)
Rv0750/-Rv1026/-
Fe_supp_jason_reseq

-0.47

-0.715

low_pH_jason_reseq

-0.4

2.175

NO_jason_reseq

-0.407

-0.633

B6_jason_reseq

0.33

-0.128

MHCII_jason_reseq

-0.84

-1.213

Isoniazid02

-1.312

0.146

Rifampicin4

0.994

1.394

Ethambutol3

-1.171

0.235

Meropenem3

-1.142

0.12

Vancomycin16

-0.422

-0.284

Rv2680_day32

-0.395

0.0

H37Rv_KO_MarP

-0.337

0.385

hypoxia_3wks

1.113

0.339

hypoxia_6wks

-0.24

-0.606

glycerol

-0.183

0.451

cholesterol

0.374

0.638

AJ

0.476

0.698

Bibs02

-0.179

-1.069

Bibs02c

0.747

0.293

BL6

-0.453

-0.845

BL6a

0.026

0.595

BXD01

-0.289

0.343

BXD010

0.499

-0.749

BXD011

-0.898

-0.281

BXD03

0.342

1.386

BXD04

-0.224

0.372

BXD05

-0.378

-0.216

BXD06

-0.434

0.752

BXD07

-0.018

0.0

BXD08

-1.291

0.243

BXD09

-1.125

1.789

CAST

0.355

0.514

CCcont

-0.976

-1.009

DS01

-1.791

1.189

DS02

-0.465

0.397

DS04

-2.625

0.354

DS0c

-0.911

1.403

GP01

-2.028

-0.667

GP02

-1.531

-0.562

GP0c

0.501

1.693

NOD

0.044

-0.234

NZO

0.646

-0.101

PWK

0.126

-0.557

H37Rv_KO_CtpC

-0.8

-0.461

H37Rv_KO_CtpD

-1.438

0.061

H37Rv_KO_Rv1272

-0.71

-1.093

H37Rv_KO_SugABC

-0.314

-0.579

H37Rv_KO_MbtN

-1.857

-0.799

Trans05

-0.511

-0.883

macrophage_unactivated

0.584

1.49

IL1

-1.323

-0.285

Rapamycin

-0.694

0.902

Tcell

-0.192

-0.313

GMCSF

-1.349

1.156

IFNab

-2.077

0.139

IFNg

-0.032

0.577

IFNg_GMCSF1

-0.421

0.418

Rv1432_day32

0.553

1.265

Rv1565c_day32

-0.625

0.0

secA2_input

-1.791

-1.796

delta_Rv3594

0.168

0.997

delta_Rv3717

0.337

2.702

delta_Rv3811

-0.125

2.198

delta_Rv0954

0.381

0.925

PonA1

-0.245

0.419

EccD1_KO

0.687

0.395

EspI_KO

0.134

-0.183

PE35_KO

-0.63

-1.272

PPE68_KO

-0.077

0.0

glycerol2

-1.092

-1.572

lignocerate

-1.383

-1.266

oleate

-1.117

0.308

phosphatidylcholine

-1.293

-1.144

acetate

-1.78

-2.331

glucAc

-1.392

-1.952

Rv0950ko

0.971

-0.172

Rv1096ko

1.04

0.477

Rv3684ko

0.576

1.916

delta_otsA_trehalose

-1.272

1.321