Top 10 genes with highest correlation to Rv0728c/serA2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2330c/lppP | (cc=0.5127) | info on Rv2330c/lppP |
| Rv2451/- | (cc=0.4823) | info on Rv2451/- |
| Rv3584/lpqE | (cc=0.4608) | info on Rv3584/lpqE |
| Rv1482c/- | (cc=0.4543) | info on Rv1482c/- |
| Rv3105c/prfB | (cc=0.448) | info on Rv3105c/prfB |
| Rv3198A/- | (cc=0.4478) | info on Rv3198A/- |
| Rv2970A/- | (cc=0.4374) | info on Rv2970A/- |
| Rv2736c/recX | (cc=0.4351) | info on Rv2736c/recX |
| Rv0463/- | (cc=0.4207) | info on Rv0463/- |
| Rv1525/wbbL2 | (cc=0.4139) | info on Rv1525/wbbL2 |
Correlation of Rv0728c/serA2 with Rv2736c/recX
Normalized LFCs for Rv0728c/serA2:
(description and provenance of datasets)
| Rv0728c/serA2 | Rv2736c/recX | |
| Fe_supp_jason_reseq | 0.584 | -0.325 |
| low_pH_jason_reseq | -0.744 | 0.888 |
| NO_jason_reseq | -0.494 | -0.541 |
| B6_jason_reseq | -0.184 | -1.467 |
| MHCII_jason_reseq | -0.151 | -1.864 |
| Isoniazid02 | 0.068 | -0.178 |
| Rifampicin4 | 0.349 | -0.217 |
| Ethambutol3 | 0.0 | -0.31 |
| Meropenem3 | 1.656 | 0.746 |
| Vancomycin16 | 0.822 | -0.106 |
| Rv2680_day32 | -0.252 | -0.359 |
| H37Rv_KO_MarP | 0.246 | -0.344 |
| hypoxia_3wks | 0.387 | -0.514 |
| hypoxia_6wks | 0.679 | -0.566 |
| glycerol | -0.471 | 1.33 |
| cholesterol | -0.371 | -0.577 |
| AJ | 0.282 | -0.121 |
| Bibs02 | -0.832 | -2.195 |
| Bibs02c | 0.42 | -0.996 |
| BL6 | 0.407 | 1.112 |
| BL6a | 0.336 | -0.212 |
| BXD01 | 0.242 | -0.519 |
| BXD010 | 0.989 | 0.861 |
| BXD011 | 1.865 | 0.391 |
| BXD03 | 0.127 | -1.518 |
| BXD04 | 0.472 | 0.203 |
| BXD05 | 0.818 | -0.813 |
| BXD06 | 0.666 | 0.19 |
| BXD07 | 0.462 | 0.931 |
| BXD08 | 0.752 | -0.482 |
| BXD09 | 0.624 | 0.432 |
| CAST | 0.342 | -1.391 |
| CCcont | -0.076 | 0.309 |
| DS01 | -0.26 | -1.323 |
| DS02 | -0.969 | -1.125 |
| DS04 | -0.707 | -2.329 |
| DS0c | -0.625 | -1.516 |
| GP01 | -0.703 | -1.456 |
| GP02 | -1.195 | -0.819 |
| GP0c | -0.776 | -1.918 |
| NOD | -0.456 | -0.734 |
| NZO | 0.538 | -2.742 |
| PWK | -0.151 | -0.102 |
| H37Rv_KO_CtpC | 0.896 | -0.085 |
| H37Rv_KO_CtpD | -1.949 | -1.52 |
| H37Rv_KO_Rv1272 | 0.626 | 0.585 |
| H37Rv_KO_SugABC | 0.361 | -1.461 |
| H37Rv_KO_MbtN | 0.712 | -1.237 |
| Trans05 | 0.327 | -0.676 |
| macrophage_unactivated | 0.0 | -0.496 |
| IL1 | 0.056 | -0.326 |
| Rapamycin | 0.678 | 0.988 |
| Tcell | 0.244 | -0.14 |
| GMCSF | 0.116 | 0.322 |
| IFNab | 0.0 | -0.13 |
| IFNg | 0.361 | 0.326 |
| IFNg_GMCSF1 | 0.71 | 0.735 |
| Rv1432_day32 | 1.709 | -0.494 |
| Rv1565c_day32 | 0.392 | 0.0 |
| secA2_input | 0.044 | 0.219 |
| delta_Rv3594 | -1.418 | -2.746 |
| delta_Rv3717 | -0.603 | -0.229 |
| delta_Rv3811 | -0.931 | -1.313 |
| delta_Rv0954 | -0.848 | -2.969 |
| PonA1 | 0.07 | -1.887 |
| EccD1_KO | 0.026 | -0.437 |
| EspI_KO | 0.242 | -1.791 |
| PE35_KO | -0.166 | -0.254 |
| PPE68_KO | -0.624 | -0.138 |
| glycerol2 | 0.242 | -0.97 |
| lignocerate | 0.407 | -1.218 |
| oleate | 0.047 | -0.373 |
| phosphatidylcholine | 0.113 | -0.679 |
| acetate | -0.113 | 0.218 |
| glucAc | 0.116 | 0.402 |
| Rv0950ko | 0.078 | -1.58 |
| Rv1096ko | -0.133 | 0.449 |
| Rv3684ko | -0.413 | -0.544 |
| delta_otsA_trehalose | -0.68 | -0.999 |