Top 10 genes with highest correlation to Rv0692/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3571/kshB | (cc=0.675) | info on Rv3571/kshB |
| Rv3493c/- | (cc=0.6735) | info on Rv3493c/- |
| Rv3495c/lprN | (cc=0.6207) | info on Rv3495c/lprN |
| Rv1590/- | (cc=0.6156) | info on Rv1590/- |
| Rv3500c/yrbE4B | (cc=0.6085) | info on Rv3500c/yrbE4B |
| Rv3616c/espA | (cc=0.607) | info on Rv3616c/espA |
| Rv1568/bioA | (cc=0.5995) | info on Rv1568/bioA |
| Rv0485/- | (cc=0.5854) | info on Rv0485/- |
| Rv3869/eccB1 | (cc=0.5847) | info on Rv3869/eccB1 |
| Rv1236/sugA | (cc=0.5842) | info on Rv1236/sugA |
Correlation of Rv0692/- with Rv3493c/-
Normalized LFCs for Rv0692/-:
(description and provenance of datasets)
| Rv0692/- | Rv3493c/- | |
| Fe_supp_jason_reseq | 0.21 | -0.365 |
| low_pH_jason_reseq | -0.669 | -1.718 |
| NO_jason_reseq | 1.15 | -0.819 |
| B6_jason_reseq | 0.624 | -1.714 |
| MHCII_jason_reseq | -0.549 | -2.063 |
| Isoniazid02 | -0.15 | -0.343 |
| Rifampicin4 | 0.888 | 0.596 |
| Ethambutol3 | 0.934 | 0.071 |
| Meropenem3 | 1.463 | -0.761 |
| Vancomycin16 | 1.173 | 0.35 |
| Rv2680_day32 | 0.0 | 0.423 |
| H37Rv_KO_MarP | -0.133 | -0.598 |
| hypoxia_3wks | -0.279 | 0.231 |
| hypoxia_6wks | 0.867 | -0.965 |
| glycerol | -2.143 | -1.102 |
| cholesterol | -4.026 | -3.343 |
| AJ | -1.751 | -1.403 |
| Bibs02 | -1.919 | -2.628 |
| Bibs02c | -1.617 | -2.657 |
| BL6 | -2.176 | -2.762 |
| BL6a | -2.01 | -2.847 |
| BXD01 | -3.209 | -1.604 |
| BXD010 | -2.013 | -2.712 |
| BXD011 | -1.977 | -2.085 |
| BXD03 | -3.272 | -2.006 |
| BXD04 | -2.748 | -1.272 |
| BXD05 | -2.503 | -1.191 |
| BXD06 | -2.384 | -2.114 |
| BXD07 | -1.954 | -1.87 |
| BXD08 | -3.338 | -2.601 |
| BXD09 | -2.578 | -2.153 |
| CAST | -2.961 | -2.836 |
| CCcont | -2.499 | -0.966 |
| DS01 | -3.003 | -3.29 |
| DS02 | -1.928 | -2.108 |
| DS04 | -2.253 | -1.717 |
| DS0c | -1.436 | -2.102 |
| GP01 | -2.029 | 0.502 |
| GP02 | -1.736 | -0.556 |
| GP0c | -0.47 | -0.416 |
| NOD | -0.744 | -2.605 |
| NZO | -1.37 | -1.166 |
| PWK | -1.131 | -2.345 |
| H37Rv_KO_CtpC | -2.491 | -2.489 |
| H37Rv_KO_CtpD | -0.74 | -2.221 |
| H37Rv_KO_Rv1272 | -2.086 | -0.943 |
| H37Rv_KO_SugABC | -0.136 | 0.799 |
| H37Rv_KO_MbtN | 0.417 | 1.151 |
| Trans05 | -1.297 | -0.569 |
| macrophage_unactivated | -0.688 | -1.092 |
| IL1 | 1.026 | 1.975 |
| Rapamycin | 1.028 | 2.949 |
| Tcell | -1.082 | 0.642 |
| GMCSF | -2.205 | -1.18 |
| IFNab | -1.608 | -1.769 |
| IFNg | 0.035 | -1.267 |
| IFNg_GMCSF1 | -1.263 | -1.244 |
| Rv1432_day32 | -1.897 | -2.092 |
| Rv1565c_day32 | 0.0 | -2.088 |
| secA2_input | -1.501 | -0.294 |
| delta_Rv3594 | 0.838 | 0.112 |
| delta_Rv3717 | 0.868 | -0.077 |
| delta_Rv3811 | -0.8 | -0.973 |
| delta_Rv0954 | 0.545 | -0.411 |
| PonA1 | 0.061 | 0.664 |
| EccD1_KO | 0.599 | 1.796 |
| EspI_KO | 0.816 | 0.961 |
| PE35_KO | 1.423 | 0.758 |
| PPE68_KO | 1.27 | 1.705 |
| glycerol2 | 1.29 | -0.787 |
| lignocerate | -1.218 | 0.358 |
| oleate | 1.226 | 1.018 |
| phosphatidylcholine | 0.451 | -0.517 |
| acetate | -0.369 | -0.201 |
| glucAc | -1.144 | -0.478 |
| Rv0950ko | -0.995 | 0.464 |
| Rv1096ko | -0.498 | 1.502 |
| Rv3684ko | -1.113 | 0.504 |
| delta_otsA_trehalose | -0.197 | 0.861 |