Top 10 genes with highest correlation to Rv0692/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3571/kshB | (cc=0.675) | info on Rv3571/kshB |
| Rv3493c/- | (cc=0.6735) | info on Rv3493c/- |
| Rv3495c/lprN | (cc=0.6207) | info on Rv3495c/lprN |
| Rv1590/- | (cc=0.6156) | info on Rv1590/- |
| Rv3500c/yrbE4B | (cc=0.6085) | info on Rv3500c/yrbE4B |
| Rv3616c/espA | (cc=0.607) | info on Rv3616c/espA |
| Rv1568/bioA | (cc=0.5995) | info on Rv1568/bioA |
| Rv0485/- | (cc=0.5854) | info on Rv0485/- |
| Rv3869/eccB1 | (cc=0.5847) | info on Rv3869/eccB1 |
| Rv1236/sugA | (cc=0.5842) | info on Rv1236/sugA |
Correlation of Rv0692/- with Rv3571/kshB
Normalized LFCs for Rv0692/-:
(description and provenance of datasets)
| Rv0692/- | Rv3571/kshB | |
| Fe_supp_jason_reseq | 0.21 | -0.273 |
| low_pH_jason_reseq | -0.669 | 0.132 |
| NO_jason_reseq | 1.15 | -0.108 |
| B6_jason_reseq | 0.624 | -0.641 |
| MHCII_jason_reseq | -0.549 | -1.689 |
| Isoniazid02 | -0.15 | 1.611 |
| Rifampicin4 | 0.888 | 0.623 |
| Ethambutol3 | 0.934 | 0.922 |
| Meropenem3 | 1.463 | 0.062 |
| Vancomycin16 | 1.173 | 0.366 |
| Rv2680_day32 | 0.0 | -2.534 |
| H37Rv_KO_MarP | -0.133 | 0.364 |
| hypoxia_3wks | -0.279 | 0.12 |
| hypoxia_6wks | 0.867 | 0.413 |
| glycerol | -2.143 | -0.671 |
| cholesterol | -4.026 | -4.243 |
| AJ | -1.751 | -2.259 |
| Bibs02 | -1.919 | -2.615 |
| Bibs02c | -1.617 | -1.073 |
| BL6 | -2.176 | -2.416 |
| BL6a | -2.01 | -1.21 |
| BXD01 | -3.209 | -2.415 |
| BXD010 | -2.013 | -1.091 |
| BXD011 | -1.977 | -2.143 |
| BXD03 | -3.272 | -2.611 |
| BXD04 | -2.748 | -1.623 |
| BXD05 | -2.503 | -2.711 |
| BXD06 | -2.384 | -2.378 |
| BXD07 | -1.954 | -2.467 |
| BXD08 | -3.338 | -1.869 |
| BXD09 | -2.578 | -1.368 |
| CAST | -2.961 | -1.995 |
| CCcont | -2.499 | -1.96 |
| DS01 | -3.003 | -2.224 |
| DS02 | -1.928 | -2.952 |
| DS04 | -2.253 | -2.823 |
| DS0c | -1.436 | -1.373 |
| GP01 | -2.029 | -1.661 |
| GP02 | -1.736 | -2.145 |
| GP0c | -0.47 | -1.468 |
| NOD | -0.744 | 0.151 |
| NZO | -1.37 | -2.618 |
| PWK | -1.131 | -1.483 |
| H37Rv_KO_CtpC | -2.491 | -1.69 |
| H37Rv_KO_CtpD | -0.74 | -0.863 |
| H37Rv_KO_Rv1272 | -2.086 | -1.012 |
| H37Rv_KO_SugABC | -0.136 | -2.482 |
| H37Rv_KO_MbtN | 0.417 | 0.349 |
| Trans05 | -1.297 | 0.374 |
| macrophage_unactivated | -0.688 | -0.919 |
| IL1 | 1.026 | -0.676 |
| Rapamycin | 1.028 | -0.961 |
| Tcell | -1.082 | -2.232 |
| GMCSF | -2.205 | -0.884 |
| IFNab | -1.608 | 0.209 |
| IFNg | 0.035 | 0.687 |
| IFNg_GMCSF1 | -1.263 | 1.247 |
| Rv1432_day32 | -1.897 | -2.182 |
| Rv1565c_day32 | 0.0 | -0.401 |
| secA2_input | -1.501 | 0.686 |
| delta_Rv3594 | 0.838 | 0.837 |
| delta_Rv3717 | 0.868 | 0.135 |
| delta_Rv3811 | -0.8 | 0.674 |
| delta_Rv0954 | 0.545 | -0.686 |
| PonA1 | 0.061 | 1.358 |
| EccD1_KO | 0.599 | 1.51 |
| EspI_KO | 0.816 | 0.485 |
| PE35_KO | 1.423 | 0.496 |
| PPE68_KO | 1.27 | 1.328 |
| glycerol2 | 1.29 | -0.82 |
| lignocerate | -1.218 | -0.442 |
| oleate | 1.226 | -0.346 |
| phosphatidylcholine | 0.451 | -0.958 |
| acetate | -0.369 | -0.406 |
| glucAc | -1.144 | -0.707 |
| Rv0950ko | -0.995 | -0.115 |
| Rv1096ko | -0.498 | 0.775 |
| Rv3684ko | -1.113 | -0.252 |
| delta_otsA_trehalose | -0.197 | -0.057 |