Top 10 genes with highest correlation to Rv0649/fabD2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1087/PE_PGRS21 | (cc=0.7114) | info on Rv1087/PE_PGRS21 |
| Rv3897c/- | (cc=0.7073) | info on Rv3897c/- |
| Rv0278c/PE_PGRS3 | (cc=0.6841) | info on Rv0278c/PE_PGRS3 |
| Rv0297/PE_PGRS5 | (cc=0.67) | info on Rv0297/PE_PGRS5 |
| Rv1818c/PE_PGRS33 | (cc=0.6317) | info on Rv1818c/PE_PGRS33 |
| Rv1755c/plcD | (cc=0.6279) | info on Rv1755c/plcD |
| Rv3344c/PE_PGRS49 | (cc=0.6244) | info on Rv3344c/PE_PGRS49 |
| Rv3345c/PE_PGRS50 | (cc=0.5911) | info on Rv3345c/PE_PGRS50 |
| Rv3653/PE_PGRS61 | (cc=0.5774) | info on Rv3653/PE_PGRS61 |
| Rv1160/mutT2 | (cc=0.5714) | info on Rv1160/mutT2 |
Correlation of Rv0649/fabD2 with Rv1087/PE_PGRS21
Normalized LFCs for Rv0649/fabD2:
(description and provenance of datasets)
| Rv0649/fabD2 | Rv1087/PE_PGRS21 | |
| Fe_supp_jason_reseq | -1.773 | -1.443 |
| low_pH_jason_reseq | -2.946 | -1.295 |
| NO_jason_reseq | -2.444 | -0.431 |
| B6_jason_reseq | -0.889 | -0.404 |
| MHCII_jason_reseq | 0.58 | -0.066 |
| Isoniazid02 | 3.067 | -1.653 |
| Rifampicin4 | 0.772 | 0.214 |
| Ethambutol3 | 1.058 | 0.196 |
| Meropenem3 | 0.952 | -0.639 |
| Vancomycin16 | -0.135 | -0.865 |
| Rv2680_day32 | 2.793 | 0.842 |
| H37Rv_KO_MarP | -0.865 | 0.162 |
| hypoxia_3wks | -2.588 | -0.427 |
| hypoxia_6wks | -2.658 | -0.727 |
| glycerol | 1.837 | 1.262 |
| cholesterol | 1.356 | 0.519 |
| AJ | 0.647 | 1.155 |
| Bibs02 | 3.449 | 0.782 |
| Bibs02c | 1.904 | 0.838 |
| BL6 | -1.637 | 0.186 |
| BL6a | -0.27 | 0.133 |
| BXD01 | 0.929 | 0.1 |
| BXD010 | -0.056 | 0.2 |
| BXD011 | -0.745 | -0.79 |
| BXD03 | 0.639 | 0.235 |
| BXD04 | -0.11 | -0.487 |
| BXD05 | -0.947 | -0.492 |
| BXD06 | -1.182 | 0.014 |
| BXD07 | -0.617 | -0.43 |
| BXD08 | -1.113 | -0.431 |
| BXD09 | -0.58 | -0.437 |
| CAST | 0.926 | -0.215 |
| CCcont | 0.236 | -0.173 |
| DS01 | -0.44 | -0.072 |
| DS02 | 1.356 | 0.414 |
| DS04 | 0.082 | 0.777 |
| DS0c | -0.094 | -0.11 |
| GP01 | 1.694 | 1.227 |
| GP02 | 1.051 | 1.357 |
| GP0c | 0.465 | 0.136 |
| NOD | 0.272 | 0.944 |
| NZO | -0.824 | -0.144 |
| PWK | -1.38 | 0.358 |
| H37Rv_KO_CtpC | -1.522 | -0.461 |
| H37Rv_KO_CtpD | -0.65 | 1.767 |
| H37Rv_KO_Rv1272 | 0.371 | 0.546 |
| H37Rv_KO_SugABC | -0.783 | 0.362 |
| H37Rv_KO_MbtN | 0.084 | 0.196 |
| Trans05 | -0.21 | 0.323 |
| macrophage_unactivated | -1.626 | -0.919 |
| IL1 | -4.494 | -2.441 |
| Rapamycin | -4.342 | -2.734 |
| Tcell | -2.023 | -1.825 |
| GMCSF | -1.946 | -0.935 |
| IFNab | -5.629 | -2.839 |
| IFNg | -4.049 | -1.497 |
| IFNg_GMCSF1 | -1.951 | -2.061 |
| Rv1432_day32 | 1.442 | 0.568 |
| Rv1565c_day32 | 1.29 | -1.084 |
| secA2_input | 2.204 | -0.551 |
| delta_Rv3594 | 0.367 | 0.095 |
| delta_Rv3717 | 0.388 | -0.109 |
| delta_Rv3811 | -1.13 | -0.254 |
| delta_Rv0954 | -2.087 | -1.503 |
| PonA1 | -0.559 | -0.04 |
| EccD1_KO | 1.079 | -0.023 |
| EspI_KO | 1.586 | -0.06 |
| PE35_KO | -0.718 | 0.219 |
| PPE68_KO | -1.357 | -0.138 |
| glycerol2 | 1.684 | 0.933 |
| lignocerate | 2.681 | 1.382 |
| oleate | 0.829 | 0.366 |
| phosphatidylcholine | 1.594 | 0.933 |
| acetate | 3.812 | 1.235 |
| glucAc | 3.156 | 1.491 |
| Rv0950ko | 0.154 | 0.289 |
| Rv1096ko | 1.852 | 0.878 |
| Rv3684ko | 1.156 | 0.57 |
| delta_otsA_trehalose | 0.329 | 1.004 |