Top 10 genes with highest correlation to Rv0644c/mmaA2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0645c/mmaA1 | (cc=0.7898) | info on Rv0645c/mmaA1 |
| Rv0473/- | (cc=0.7239) | info on Rv0473/- |
| Rv0425c/ctpH | (cc=0.7169) | info on Rv0425c/ctpH |
| Rv3842c/glpQ1 | (cc=0.7153) | info on Rv3842c/glpQ1 |
| Rv1058/fadD14 | (cc=0.713) | info on Rv1058/fadD14 |
| Rv0502/- | (cc=0.7025) | info on Rv0502/- |
| Rv2185c/TB16.3 | (cc=0.6949) | info on Rv2185c/TB16.3 |
| Rv1780/- | (cc=0.6878) | info on Rv1780/- |
| Rv1386/PE15 | (cc=0.6834) | info on Rv1386/PE15 |
| Rv3050c/- | (cc=0.6671) | info on Rv3050c/- |
Correlation of Rv0644c/mmaA2 with Rv1780/-
Normalized LFCs for Rv0644c/mmaA2:
(description and provenance of datasets)
| Rv0644c/mmaA2 | Rv1780/- | |
| Fe_supp_jason_reseq | -0.227 | -1.778 |
| low_pH_jason_reseq | 1.2 | -0.34 |
| NO_jason_reseq | 0.882 | -2.084 |
| B6_jason_reseq | 0.5 | -3.549 |
| MHCII_jason_reseq | -0.154 | -0.977 |
| Isoniazid02 | 0.963 | 2.506 |
| Rifampicin4 | -0.46 | -0.639 |
| Ethambutol3 | 2.038 | 1.978 |
| Meropenem3 | 0.24 | 0.727 |
| Vancomycin16 | 1.926 | -0.491 |
| Rv2680_day32 | 3.409 | 1.835 |
| H37Rv_KO_MarP | 0.831 | -0.267 |
| hypoxia_3wks | 3.688 | 1.288 |
| hypoxia_6wks | 4.063 | 3.454 |
| glycerol | -0.208 | 2.188 |
| cholesterol | -0.986 | 2.714 |
| AJ | 0.427 | -0.768 |
| Bibs02 | -0.621 | 1.197 |
| Bibs02c | -0.918 | 1.17 |
| BL6 | 2.082 | 1.216 |
| BL6a | 2.393 | 1.807 |
| BXD01 | 3.306 | 2.028 |
| BXD010 | 2.737 | 1.29 |
| BXD011 | 3.421 | 3.362 |
| BXD03 | 1.467 | 1.659 |
| BXD04 | 1.779 | 2.619 |
| BXD05 | 2.071 | 1.815 |
| BXD06 | 2.375 | 3.056 |
| BXD07 | 2.536 | 1.865 |
| BXD08 | 2.516 | 1.959 |
| BXD09 | 3.211 | 2.253 |
| CAST | 0.611 | -1.922 |
| CCcont | 0.434 | 0.954 |
| DS01 | -1.353 | 0.435 |
| DS02 | 0.203 | -1.03 |
| DS04 | 1.025 | 0.232 |
| DS0c | -0.332 | 0.74 |
| GP01 | 2.536 | 2.552 |
| GP02 | 2.939 | 2.909 |
| GP0c | 1.688 | 2.635 |
| NOD | 1.593 | -1.01 |
| NZO | 1.231 | -0.123 |
| PWK | -0.347 | -1.451 |
| H37Rv_KO_CtpC | 0.238 | 1.377 |
| H37Rv_KO_CtpD | 1.411 | -0.826 |
| H37Rv_KO_Rv1272 | 2.077 | 1.908 |
| H37Rv_KO_SugABC | 1.754 | 2.077 |
| H37Rv_KO_MbtN | 2.539 | 3.96 |
| Trans05 | 2.578 | 2.432 |
| macrophage_unactivated | -1.171 | -0.189 |
| IL1 | -0.326 | -1.264 |
| Rapamycin | -1.252 | -0.85 |
| Tcell | 1.665 | 2.444 |
| GMCSF | -0.914 | -1.009 |
| IFNab | -1.778 | 0.641 |
| IFNg | -1.547 | -1.732 |
| IFNg_GMCSF1 | -1.574 | -3.126 |
| Rv1432_day32 | 5.684 | 2.211 |
| Rv1565c_day32 | 0.229 | 1.35 |
| secA2_input | -0.753 | -1.45 |
| delta_Rv3594 | 0.817 | 1.334 |
| delta_Rv3717 | 2.513 | 2.956 |
| delta_Rv3811 | 1.089 | 1.866 |
| delta_Rv0954 | -0.756 | -1.335 |
| PonA1 | -1.215 | -2.652 |
| EccD1_KO | -1.681 | -2.993 |
| EspI_KO | -1.646 | -2.21 |
| PE35_KO | -1.555 | -2.634 |
| PPE68_KO | -2.332 | -2.102 |
| glycerol2 | 1.843 | 0.483 |
| lignocerate | 1.074 | 0.36 |
| oleate | 0.81 | 0.034 |
| phosphatidylcholine | 1.455 | 0.653 |
| acetate | 0.188 | -0.374 |
| glucAc | 0.068 | -0.518 |
| Rv0950ko | -0.178 | -2.783 |
| Rv1096ko | -1.246 | -3.685 |
| Rv3684ko | 0.2 | -2.731 |
| delta_otsA_trehalose | -1.578 | -1.034 |