Top 10 genes with highest correlation to Rv0626/vapB5:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2468A/- | (cc=0.398) | info on Rv2468A/- |
| Rv1003/- | (cc=0.3757) | info on Rv1003/- |
| Rv3208/- | (cc=0.3714) | info on Rv3208/- |
| Rv0328/- | (cc=0.3651) | info on Rv0328/- |
| Rv1082/mca | (cc=0.3574) | info on Rv1082/mca |
| Rv0116c/ldtA | (cc=0.3547) | info on Rv0116c/ldtA |
| Rv2927c/- | (cc=0.3416) | info on Rv2927c/- |
| Rv2446c/- | (cc=0.3343) | info on Rv2446c/- |
| Rv0345/- | (cc=0.3315) | info on Rv0345/- |
| Rv2835c/ugpA | (cc=0.32) | info on Rv2835c/ugpA |
Correlation of Rv0626/vapB5 with Rv1003/-
Normalized LFCs for Rv0626/vapB5:
(description and provenance of datasets)
| Rv0626/vapB5 | Rv1003/- | |
| Fe_supp_jason_reseq | 1.264 | 0.526 |
| low_pH_jason_reseq | -0.472 | -0.848 |
| NO_jason_reseq | -1.05 | 0.137 |
| B6_jason_reseq | 0.579 | 0.37 |
| MHCII_jason_reseq | -2.098 | -0.738 |
| Isoniazid02 | 0.08 | 1.125 |
| Rifampicin4 | 1.067 | 1.053 |
| Ethambutol3 | 0.0 | 0.347 |
| Meropenem3 | 0.497 | -0.235 |
| Vancomycin16 | 0.358 | 0.639 |
| Rv2680_day32 | 0.0 | -0.522 |
| H37Rv_KO_MarP | -1.352 | -0.844 |
| hypoxia_3wks | 0.997 | -0.379 |
| hypoxia_6wks | -0.299 | 0.125 |
| glycerol | 0.426 | -0.075 |
| cholesterol | 0.997 | 1.517 |
| AJ | 0.928 | -1.598 |
| Bibs02 | -0.581 | 0.963 |
| Bibs02c | -1.625 | -0.156 |
| BL6 | 1.436 | 0.545 |
| BL6a | 0.136 | 0.138 |
| BXD01 | -0.327 | 0.658 |
| BXD010 | 0.581 | 1.844 |
| BXD011 | -0.053 | 0.211 |
| BXD03 | 0.559 | 0.418 |
| BXD04 | -0.263 | 1.42 |
| BXD05 | 0.713 | 0.181 |
| BXD06 | -0.579 | 0.483 |
| BXD07 | 0.544 | 0.313 |
| BXD08 | 0.092 | 1.245 |
| BXD09 | -0.073 | 0.435 |
| CAST | -0.023 | -0.085 |
| CCcont | -0.062 | 0.754 |
| DS01 | 0.556 | -1.177 |
| DS02 | -0.358 | -0.337 |
| DS04 | 0.096 | -1.477 |
| DS0c | 0.022 | -0.958 |
| GP01 | -1.056 | -1.001 |
| GP02 | -0.964 | -0.767 |
| GP0c | -0.757 | -0.896 |
| NOD | -0.714 | -0.348 |
| NZO | 1.841 | -1.24 |
| PWK | 0.313 | 0.136 |
| H37Rv_KO_CtpC | -1.932 | 0.502 |
| H37Rv_KO_CtpD | -2.17 | -0.964 |
| H37Rv_KO_Rv1272 | -0.612 | 0.234 |
| H37Rv_KO_SugABC | 1.871 | 1.715 |
| H37Rv_KO_MbtN | -1.293 | 1.826 |
| Trans05 | 0.567 | -1.454 |
| macrophage_unactivated | -0.527 | 0.0 |
| IL1 | 0.679 | -0.409 |
| Rapamycin | -0.436 | -0.135 |
| Tcell | -0.629 | 0.411 |
| GMCSF | 1.465 | 0.919 |
| IFNab | 0.033 | 0.946 |
| IFNg | 1.419 | 1.021 |
| IFNg_GMCSF1 | 0.405 | 1.093 |
| Rv1432_day32 | 0.0 | -0.278 |
| Rv1565c_day32 | -0.218 | -0.415 |
| secA2_input | 0.233 | -0.255 |
| delta_Rv3594 | 1.53 | 2.302 |
| delta_Rv3717 | 0.159 | 1.749 |
| delta_Rv3811 | -0.683 | 2.414 |
| delta_Rv0954 | 0.736 | 0.561 |
| PonA1 | 2.05 | 2.364 |
| EccD1_KO | 1.385 | 1.286 |
| EspI_KO | 0.271 | 1.449 |
| PE35_KO | -2.99 | -0.712 |
| PPE68_KO | -1.353 | -0.102 |
| glycerol2 | -0.605 | -2.044 |
| lignocerate | 0.475 | -1.316 |
| oleate | -3.595 | -1.533 |
| phosphatidylcholine | -0.854 | -1.293 |
| acetate | 0.381 | -0.229 |
| glucAc | 0.302 | -0.717 |
| Rv0950ko | -1.737 | -0.823 |
| Rv1096ko | -0.419 | -0.392 |
| Rv3684ko | -0.668 | -1.877 |
| delta_otsA_trehalose | 0.366 | -0.105 |