Top 10 genes with highest correlation to Rv0613c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1163/narJ | (cc=0.6212) | info on Rv1163/narJ |
| Rv0614/- | (cc=0.6192) | info on Rv0614/- |
| Rv2490c/PE_PGRS43 | (cc=0.6173) | info on Rv2490c/PE_PGRS43 |
| Rv0648/- | (cc=0.5761) | info on Rv0648/- |
| Rv2741/PE_PGRS47 | (cc=0.5704) | info on Rv2741/PE_PGRS47 |
| Rv1378c/- | (cc=0.5572) | info on Rv1378c/- |
| Rv2669/- | (cc=0.5507) | info on Rv2669/- |
| Rv3026c/- | (cc=0.5366) | info on Rv3026c/- |
| Rv3897c/- | (cc=0.5273) | info on Rv3897c/- |
| Rv3590c/PE_PGRS58 | (cc=0.5228) | info on Rv3590c/PE_PGRS58 |
Correlation of Rv0613c/- with Rv1163/narJ
Normalized LFCs for Rv0613c/-:
(description and provenance of datasets)
| Rv0613c/- | Rv1163/narJ | |
| Fe_supp_jason_reseq | -1.264 | 0.26 |
| low_pH_jason_reseq | -2.106 | -1.208 |
| NO_jason_reseq | -0.643 | -0.704 |
| B6_jason_reseq | 0.221 | -0.496 |
| MHCII_jason_reseq | 0.773 | 0.796 |
| Isoniazid02 | -0.576 | 0.314 |
| Rifampicin4 | 0.187 | 0.647 |
| Ethambutol3 | 0.77 | 0.12 |
| Meropenem3 | -0.367 | -1.711 |
| Vancomycin16 | 0.183 | -0.419 |
| Rv2680_day32 | 1.226 | 0.365 |
| H37Rv_KO_MarP | 0.676 | 0.178 |
| hypoxia_3wks | -0.538 | 0.443 |
| hypoxia_6wks | -0.505 | -0.038 |
| glycerol | 1.002 | 0.748 |
| cholesterol | 0.774 | 0.31 |
| AJ | 0.59 | 0.36 |
| Bibs02 | 0.188 | 0.901 |
| Bibs02c | 0.45 | 0.562 |
| BL6 | -0.553 | -1.318 |
| BL6a | -0.339 | -0.023 |
| BXD01 | -0.472 | -0.246 |
| BXD010 | -0.253 | -0.741 |
| BXD011 | -0.238 | -1.038 |
| BXD03 | -0.886 | -0.501 |
| BXD04 | 0.215 | -0.399 |
| BXD05 | -1.429 | -0.543 |
| BXD06 | -0.675 | -0.914 |
| BXD07 | -0.7 | -0.125 |
| BXD08 | -0.024 | 0.008 |
| BXD09 | -1.03 | -0.544 |
| CAST | 0.496 | 0.117 |
| CCcont | -0.65 | -0.325 |
| DS01 | 0.659 | 0.171 |
| DS02 | 0.523 | 0.317 |
| DS04 | 0.758 | 0.742 |
| DS0c | 0.24 | 0.988 |
| GP01 | 0.23 | -0.318 |
| GP02 | 0.881 | 0.174 |
| GP0c | -0.06 | -0.592 |
| NOD | -0.041 | 0.268 |
| NZO | 0.549 | 0.228 |
| PWK | 0.678 | 0.205 |
| H37Rv_KO_CtpC | -0.786 | 0.37 |
| H37Rv_KO_CtpD | -0.119 | 0.48 |
| H37Rv_KO_Rv1272 | -0.459 | -0.163 |
| H37Rv_KO_SugABC | -1.183 | 0.011 |
| H37Rv_KO_MbtN | -1.082 | -1.681 |
| Trans05 | -2.271 | -1.221 |
| macrophage_unactivated | -0.208 | -0.868 |
| IL1 | -0.403 | -0.516 |
| Rapamycin | -0.144 | -0.052 |
| Tcell | -1.043 | -1.251 |
| GMCSF | -0.277 | -0.333 |
| IFNab | -0.967 | -0.961 |
| IFNg | -1.563 | -1.753 |
| IFNg_GMCSF1 | -0.239 | -0.672 |
| Rv1432_day32 | -0.07 | 0.142 |
| Rv1565c_day32 | 0.349 | 0.046 |
| secA2_input | 0.03 | 0.136 |
| delta_Rv3594 | 0.364 | -0.607 |
| delta_Rv3717 | 0.086 | -0.565 |
| delta_Rv3811 | 0.076 | -0.501 |
| delta_Rv0954 | -0.068 | 0.207 |
| PonA1 | -0.429 | 0.248 |
| EccD1_KO | 0.283 | -0.474 |
| EspI_KO | 0.317 | -0.029 |
| PE35_KO | -0.158 | 0.537 |
| PPE68_KO | -0.262 | 0.777 |
| glycerol2 | 0.419 | 0.153 |
| lignocerate | 0.799 | 0.917 |
| oleate | 0.618 | 0.383 |
| phosphatidylcholine | 0.322 | 0.798 |
| acetate | -0.143 | 0.261 |
| glucAc | 0.238 | 0.388 |
| Rv0950ko | -0.063 | 0.066 |
| Rv1096ko | 1.164 | 0.838 |
| Rv3684ko | 0.069 | 0.94 |
| delta_otsA_trehalose | -1.054 | -0.968 |