Top 10 genes with highest correlation to Rv0605/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3292/- | (cc=0.5317) | info on Rv3292/- |
| Rv2756c/hsdM | (cc=0.5198) | info on Rv2756c/hsdM |
| Rv1175c/fadH | (cc=0.488) | info on Rv1175c/fadH |
| Rv2634c/PE_PGRS46 | (cc=0.483) | info on Rv2634c/PE_PGRS46 |
| Rv1000c/- | (cc=0.4686) | info on Rv1000c/- |
| Rv2310/- | (cc=0.4612) | info on Rv2310/- |
| Rv2240c/- | (cc=0.4571) | info on Rv2240c/- |
| Rv3138/pflA | (cc=0.4519) | info on Rv3138/pflA |
| Rv1200/- | (cc=0.4481) | info on Rv1200/- |
| Rv0441c/- | (cc=0.443) | info on Rv0441c/- |
Correlation of Rv0605/- with Rv2240c/-
Normalized LFCs for Rv0605/-:
(description and provenance of datasets)
| Rv0605/- | Rv2240c/- | |
| Fe_supp_jason_reseq | -0.995 | 0.867 |
| low_pH_jason_reseq | -0.028 | -0.343 |
| NO_jason_reseq | -0.215 | -0.452 |
| B6_jason_reseq | -0.115 | -1.099 |
| MHCII_jason_reseq | 0.297 | -0.179 |
| Isoniazid02 | -0.274 | 0.039 |
| Rifampicin4 | 0.195 | 0.704 |
| Ethambutol3 | -0.371 | 0.883 |
| Meropenem3 | -0.589 | 1.139 |
| Vancomycin16 | -0.119 | 0.955 |
| Rv2680_day32 | -0.777 | -0.647 |
| H37Rv_KO_MarP | 0.391 | 0.401 |
| hypoxia_3wks | -0.159 | -0.797 |
| hypoxia_6wks | -0.478 | -0.616 |
| glycerol | 0.127 | -0.462 |
| cholesterol | 0.526 | -0.669 |
| AJ | -0.207 | -1.476 |
| Bibs02 | -0.038 | -1.416 |
| Bibs02c | 0.708 | -0.881 |
| BL6 | 0.372 | 0.072 |
| BL6a | 0.194 | -0.74 |
| BXD01 | 0.018 | -1.069 |
| BXD010 | -0.298 | -0.365 |
| BXD011 | 1.443 | -0.418 |
| BXD03 | 0.08 | -0.744 |
| BXD04 | -0.205 | -1.015 |
| BXD05 | 0.244 | -0.442 |
| BXD06 | 0.109 | -0.352 |
| BXD07 | 0.549 | -0.606 |
| BXD08 | 0.241 | -0.9 |
| BXD09 | 0.128 | -0.095 |
| CAST | -0.319 | -1.185 |
| CCcont | 0.223 | 0.372 |
| DS01 | -0.099 | -0.938 |
| DS02 | 0.117 | -0.06 |
| DS04 | -0.115 | -1.639 |
| DS0c | 0.165 | 0.503 |
| GP01 | 0.185 | -0.339 |
| GP02 | 0.345 | 0.732 |
| GP0c | 0.099 | 0.301 |
| NOD | 0.22 | -1.791 |
| NZO | 0.152 | -1.568 |
| PWK | -0.041 | -0.308 |
| H37Rv_KO_CtpC | -0.399 | -0.807 |
| H37Rv_KO_CtpD | 1.48 | 1.292 |
| H37Rv_KO_Rv1272 | -0.807 | -0.911 |
| H37Rv_KO_SugABC | 0.127 | 1.024 |
| H37Rv_KO_MbtN | -0.069 | -1.696 |
| Trans05 | -0.126 | -0.15 |
| macrophage_unactivated | 0.306 | -0.028 |
| IL1 | 1.323 | 1.332 |
| Rapamycin | 1.335 | 1.814 |
| Tcell | 0.316 | -0.495 |
| GMCSF | 0.919 | 2.009 |
| IFNab | 0.493 | 1.146 |
| IFNg | 0.583 | 0.796 |
| IFNg_GMCSF1 | 0.786 | 0.691 |
| Rv1432_day32 | 0.348 | -0.141 |
| Rv1565c_day32 | 0.022 | 0.595 |
| secA2_input | 0.011 | -0.668 |
| delta_Rv3594 | -0.503 | -0.268 |
| delta_Rv3717 | 0.186 | -0.639 |
| delta_Rv3811 | -0.778 | -0.473 |
| delta_Rv0954 | -0.32 | -0.846 |
| PonA1 | -0.83 | -0.507 |
| EccD1_KO | 0.714 | 0.431 |
| EspI_KO | 0.553 | 0.975 |
| PE35_KO | 1.275 | 0.7 |
| PPE68_KO | 0.733 | 0.614 |
| glycerol2 | 0.502 | 2.79 |
| lignocerate | 1.359 | 3.113 |
| oleate | -0.024 | -1.733 |
| phosphatidylcholine | 0.926 | 2.518 |
| acetate | 0.638 | 3.621 |
| glucAc | 1.051 | 3.241 |
| Rv0950ko | 0.847 | -0.38 |
| Rv1096ko | 1.056 | -0.021 |
| Rv3684ko | 1.205 | 0.249 |
| delta_otsA_trehalose | -0.234 | 2.537 |