Top 10 genes with highest correlation to Rv0605/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3292/- | (cc=0.5317) | info on Rv3292/- |
| Rv2756c/hsdM | (cc=0.5198) | info on Rv2756c/hsdM |
| Rv1175c/fadH | (cc=0.488) | info on Rv1175c/fadH |
| Rv2634c/PE_PGRS46 | (cc=0.483) | info on Rv2634c/PE_PGRS46 |
| Rv1000c/- | (cc=0.4686) | info on Rv1000c/- |
| Rv2310/- | (cc=0.4612) | info on Rv2310/- |
| Rv2240c/- | (cc=0.4571) | info on Rv2240c/- |
| Rv3138/pflA | (cc=0.4519) | info on Rv3138/pflA |
| Rv1200/- | (cc=0.4481) | info on Rv1200/- |
| Rv0441c/- | (cc=0.443) | info on Rv0441c/- |
Correlation of Rv0605/- with Rv1175c/fadH
Normalized LFCs for Rv0605/-:
(description and provenance of datasets)
| Rv0605/- | Rv1175c/fadH | |
| Fe_supp_jason_reseq | -0.995 | -0.78 |
| low_pH_jason_reseq | -0.028 | -0.489 |
| NO_jason_reseq | -0.215 | -0.452 |
| B6_jason_reseq | -0.115 | -0.548 |
| MHCII_jason_reseq | 0.297 | -0.009 |
| Isoniazid02 | -0.274 | -0.784 |
| Rifampicin4 | 0.195 | 0.401 |
| Ethambutol3 | -0.371 | -0.703 |
| Meropenem3 | -0.589 | -1.731 |
| Vancomycin16 | -0.119 | -0.629 |
| Rv2680_day32 | -0.777 | -0.947 |
| H37Rv_KO_MarP | 0.391 | 0.13 |
| hypoxia_3wks | -0.159 | 0.658 |
| hypoxia_6wks | -0.478 | -0.088 |
| glycerol | 0.127 | 0.015 |
| cholesterol | 0.526 | 0.273 |
| AJ | -0.207 | -0.279 |
| Bibs02 | -0.038 | -0.191 |
| Bibs02c | 0.708 | -0.155 |
| BL6 | 0.372 | 0.0 |
| BL6a | 0.194 | -0.043 |
| BXD01 | 0.018 | -0.445 |
| BXD010 | -0.298 | -0.046 |
| BXD011 | 1.443 | 0.178 |
| BXD03 | 0.08 | 0.111 |
| BXD04 | -0.205 | 0.0 |
| BXD05 | 0.244 | 0.488 |
| BXD06 | 0.109 | -0.307 |
| BXD07 | 0.549 | -0.246 |
| BXD08 | 0.241 | -0.429 |
| BXD09 | 0.128 | 0.257 |
| CAST | -0.319 | 0.174 |
| CCcont | 0.223 | -0.121 |
| DS01 | -0.099 | -0.342 |
| DS02 | 0.117 | -0.128 |
| DS04 | -0.115 | -0.429 |
| DS0c | 0.165 | -0.176 |
| GP01 | 0.185 | 0.125 |
| GP02 | 0.345 | -0.992 |
| GP0c | 0.099 | -0.76 |
| NOD | 0.22 | -0.148 |
| NZO | 0.152 | -0.803 |
| PWK | -0.041 | -0.503 |
| H37Rv_KO_CtpC | -0.399 | -0.071 |
| H37Rv_KO_CtpD | 1.48 | 1.533 |
| H37Rv_KO_Rv1272 | -0.807 | 0.161 |
| H37Rv_KO_SugABC | 0.127 | 0.1 |
| H37Rv_KO_MbtN | -0.069 | -0.108 |
| Trans05 | -0.126 | 0.474 |
| macrophage_unactivated | 0.306 | 0.379 |
| IL1 | 1.323 | -0.163 |
| Rapamycin | 1.335 | 0.239 |
| Tcell | 0.316 | 0.391 |
| GMCSF | 0.919 | 0.488 |
| IFNab | 0.493 | -0.166 |
| IFNg | 0.583 | 0.142 |
| IFNg_GMCSF1 | 0.786 | 0.245 |
| Rv1432_day32 | 0.348 | -0.017 |
| Rv1565c_day32 | 0.022 | -0.011 |
| secA2_input | 0.011 | 0.214 |
| delta_Rv3594 | -0.503 | -0.041 |
| delta_Rv3717 | 0.186 | -0.214 |
| delta_Rv3811 | -0.778 | -0.297 |
| delta_Rv0954 | -0.32 | 0.287 |
| PonA1 | -0.83 | -0.031 |
| EccD1_KO | 0.714 | 0.793 |
| EspI_KO | 0.553 | 0.0 |
| PE35_KO | 1.275 | 0.79 |
| PPE68_KO | 0.733 | 0.294 |
| glycerol2 | 0.502 | 0.615 |
| lignocerate | 1.359 | 0.789 |
| oleate | -0.024 | 0.077 |
| phosphatidylcholine | 0.926 | 0.727 |
| acetate | 0.638 | 0.068 |
| glucAc | 1.051 | 0.124 |
| Rv0950ko | 0.847 | -0.057 |
| Rv1096ko | 1.056 | -0.329 |
| Rv3684ko | 1.205 | -0.095 |
| delta_otsA_trehalose | -0.234 | 0.42 |