Top 10 genes with highest correlation to Rv0592/mce2D:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3839/- | (cc=0.6059) | info on Rv3839/- |
| Rv0551c/fadD8 | (cc=0.5984) | info on Rv0551c/fadD8 |
| Rv0303/- | (cc=0.5553) | info on Rv0303/- |
| Rv3294c/- | (cc=0.5103) | info on Rv3294c/- |
| Rv1761c/- | (cc=0.5029) | info on Rv1761c/- |
| Rv3714c/- | (cc=0.4955) | info on Rv3714c/- |
| Rv3363c/- | (cc=0.4948) | info on Rv3363c/- |
| Rv0443/- | (cc=0.4587) | info on Rv0443/- |
| Rv3532/PPE61 | (cc=0.4437) | info on Rv3532/PPE61 |
| Rv1262c/- | (cc=0.4415) | info on Rv1262c/- |
Correlation of Rv0592/mce2D with Rv0303/-
Normalized LFCs for Rv0592/mce2D:
(description and provenance of datasets)
| Rv0592/mce2D | Rv0303/- | |
| Fe_supp_jason_reseq | 0.622 | 0.071 |
| low_pH_jason_reseq | -0.049 | -0.577 |
| NO_jason_reseq | 0.144 | -0.494 |
| B6_jason_reseq | 0.552 | 0.857 |
| MHCII_jason_reseq | 0.342 | -0.077 |
| Isoniazid02 | 0.06 | -0.162 |
| Rifampicin4 | -0.68 | -0.13 |
| Ethambutol3 | -0.43 | -0.206 |
| Meropenem3 | 0.497 | -0.156 |
| Vancomycin16 | 0.109 | -0.127 |
| Rv2680_day32 | -0.357 | 0.829 |
| H37Rv_KO_MarP | -0.135 | 0.241 |
| hypoxia_3wks | -0.124 | 0.136 |
| hypoxia_6wks | 0.217 | 0.66 |
| glycerol | -0.298 | -0.13 |
| cholesterol | -0.358 | -0.764 |
| AJ | 0.299 | -0.343 |
| Bibs02 | 0.323 | -0.65 |
| Bibs02c | 0.488 | 0.853 |
| BL6 | 0.835 | 0.246 |
| BL6a | 0.08 | 0.098 |
| BXD01 | 0.599 | -0.735 |
| BXD010 | 0.212 | -0.357 |
| BXD011 | -0.054 | -0.805 |
| BXD03 | 0.56 | -0.487 |
| BXD04 | 0.261 | -0.092 |
| BXD05 | 0.072 | -0.316 |
| BXD06 | -0.134 | -0.356 |
| BXD07 | 0.127 | -0.369 |
| BXD08 | 0.171 | -1.018 |
| BXD09 | -0.142 | -0.325 |
| CAST | 0.889 | 0.317 |
| CCcont | -0.173 | -0.969 |
| DS01 | 0.577 | -0.075 |
| DS02 | 0.227 | 0.325 |
| DS04 | 0.943 | 0.24 |
| DS0c | 0.732 | 0.239 |
| GP01 | 0.521 | -0.658 |
| GP02 | 0.055 | -1.356 |
| GP0c | -0.255 | -0.727 |
| NOD | 0.473 | 0.436 |
| NZO | 0.257 | -0.376 |
| PWK | 0.347 | 0.159 |
| H37Rv_KO_CtpC | 0.517 | -0.116 |
| H37Rv_KO_CtpD | 0.525 | 0.669 |
| H37Rv_KO_Rv1272 | -0.122 | 0.418 |
| H37Rv_KO_SugABC | -1.55 | -1.585 |
| H37Rv_KO_MbtN | -0.273 | -1.073 |
| Trans05 | -0.716 | -0.511 |
| macrophage_unactivated | 0.48 | -0.177 |
| IL1 | -0.122 | -0.092 |
| Rapamycin | 0.239 | -0.733 |
| Tcell | 0.375 | -0.287 |
| GMCSF | 0.401 | -0.301 |
| IFNab | -0.06 | -0.856 |
| IFNg | 0.259 | -0.083 |
| IFNg_GMCSF1 | 0.126 | -0.984 |
| Rv1432_day32 | 1.352 | 0.31 |
| Rv1565c_day32 | 0.377 | 0.028 |
| secA2_input | -0.081 | 0.554 |
| delta_Rv3594 | 0.121 | -0.58 |
| delta_Rv3717 | -0.247 | -0.312 |
| delta_Rv3811 | -0.223 | -0.739 |
| delta_Rv0954 | -0.654 | -0.868 |
| PonA1 | 0.069 | -0.119 |
| EccD1_KO | -0.664 | -0.197 |
| EspI_KO | -0.359 | -0.836 |
| PE35_KO | -0.89 | -0.744 |
| PPE68_KO | -0.586 | -0.733 |
| glycerol2 | -0.021 | -0.067 |
| lignocerate | -0.253 | -0.311 |
| oleate | -0.223 | 0.024 |
| phosphatidylcholine | -0.085 | -0.126 |
| acetate | -0.374 | -0.603 |
| glucAc | -0.529 | -0.315 |
| Rv0950ko | 0.89 | 0.651 |
| Rv1096ko | 0.983 | 1.095 |
| Rv3684ko | -0.193 | 0.956 |
| delta_otsA_trehalose | 3.282 | 1.464 |