Top 10 genes with highest correlation to Rv0572c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0443/- | (cc=0.5626) | info on Rv0443/- |
| Rv3742c/- | (cc=0.5123) | info on Rv3742c/- |
| Rv2777c/- | (cc=0.5088) | info on Rv2777c/- |
| Rv2689c/- | (cc=0.5066) | info on Rv2689c/- |
| Rv3555c/- | (cc=0.4841) | info on Rv3555c/- |
| Rv1087/PE_PGRS21 | (cc=0.4734) | info on Rv1087/PE_PGRS21 |
| Rv3738c/PPE66 | (cc=0.4718) | info on Rv3738c/PPE66 |
| Rv1604/impA | (cc=0.4639) | info on Rv1604/impA |
| Rv3287c/rsbW | (cc=0.4552) | info on Rv3287c/rsbW |
| Rv2892c/PPE45 | (cc=0.4528) | info on Rv2892c/PPE45 |
Correlation of Rv0572c/- with Rv3555c/-
Normalized LFCs for Rv0572c/-:
(description and provenance of datasets)
| Rv0572c/- | Rv3555c/- | |
| Fe_supp_jason_reseq | -0.704 | -1.642 |
| low_pH_jason_reseq | -0.642 | -0.427 |
| NO_jason_reseq | -0.113 | -0.158 |
| B6_jason_reseq | -0.323 | -3.052 |
| MHCII_jason_reseq | -0.164 | -0.977 |
| Isoniazid02 | -0.442 | -0.247 |
| Rifampicin4 | 0.195 | -0.523 |
| Ethambutol3 | 0.112 | -0.153 |
| Meropenem3 | -0.071 | 0.024 |
| Vancomycin16 | 0.082 | 0.0 |
| Rv2680_day32 | -0.024 | -0.916 |
| H37Rv_KO_MarP | -0.349 | 0.103 |
| hypoxia_3wks | 0.02 | -0.267 |
| hypoxia_6wks | 0.52 | -1.361 |
| glycerol | 0.786 | -0.554 |
| cholesterol | 0.303 | 0.864 |
| AJ | -0.501 | -0.297 |
| Bibs02 | 1.257 | -0.408 |
| Bibs02c | 0.668 | -1.881 |
| BL6 | 0.552 | 0.627 |
| BL6a | 0.402 | 0.785 |
| BXD01 | -0.145 | 1.705 |
| BXD010 | 0.242 | 0.278 |
| BXD011 | 0.82 | 0.87 |
| BXD03 | 0.888 | 1.032 |
| BXD04 | 0.015 | 2.404 |
| BXD05 | 0.184 | -0.056 |
| BXD06 | 0.319 | 1.189 |
| BXD07 | 0.434 | 1.662 |
| BXD08 | 0.233 | 1.208 |
| BXD09 | 0.017 | 1.228 |
| CAST | 0.047 | -1.49 |
| CCcont | 0.799 | 0.0 |
| DS01 | -0.284 | -0.197 |
| DS02 | -0.08 | -0.38 |
| DS04 | 0.055 | -0.984 |
| DS0c | -0.036 | -0.596 |
| GP01 | 0.362 | 2.544 |
| GP02 | 2.156 | 2.419 |
| GP0c | 0.117 | 2.452 |
| NOD | 0.063 | -0.392 |
| NZO | 0.032 | -1.011 |
| PWK | 0.047 | 0.61 |
| H37Rv_KO_CtpC | 1.011 | 1.632 |
| H37Rv_KO_CtpD | 0.638 | 1.273 |
| H37Rv_KO_Rv1272 | 0.674 | 0.351 |
| H37Rv_KO_SugABC | 0.184 | 0.865 |
| H37Rv_KO_MbtN | -0.143 | 0.118 |
| Trans05 | 0.783 | 1.333 |
| macrophage_unactivated | 0.338 | -1.13 |
| IL1 | -0.255 | 0.169 |
| Rapamycin | -0.071 | -0.878 |
| Tcell | -0.046 | 0.362 |
| GMCSF | -0.074 | -2.075 |
| IFNab | -0.348 | -1.312 |
| IFNg | -0.216 | -1.601 |
| IFNg_GMCSF1 | -0.27 | -1.882 |
| Rv1432_day32 | -0.229 | 0.0 |
| Rv1565c_day32 | 0.662 | 0.535 |
| secA2_input | 0.008 | -0.186 |
| delta_Rv3594 | -0.184 | -0.626 |
| delta_Rv3717 | -0.034 | -0.693 |
| delta_Rv3811 | 0.039 | -1.054 |
| delta_Rv0954 | -0.421 | -1.452 |
| PonA1 | -0.517 | -2.038 |
| EccD1_KO | -0.056 | -1.536 |
| EspI_KO | 0.482 | -0.279 |
| PE35_KO | -0.23 | -0.995 |
| PPE68_KO | -0.237 | -1.091 |
| glycerol2 | 0.902 | 0.601 |
| lignocerate | 1.179 | -0.505 |
| oleate | 0.103 | 0.425 |
| phosphatidylcholine | 0.852 | 0.482 |
| acetate | 0.071 | -0.883 |
| glucAc | 0.395 | -1.352 |
| Rv0950ko | 0.063 | -0.694 |
| Rv1096ko | 0.763 | 0.781 |
| Rv3684ko | 0.331 | 0.301 |
| delta_otsA_trehalose | 2.429 | 1.858 |