Top 10 genes with highest correlation to Rv0501/galE2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0502/- | (cc=0.7955) | info on Rv0502/- |
| Rv2004c/- | (cc=0.6697) | info on Rv2004c/- |
| Rv2185c/TB16.3 | (cc=0.6446) | info on Rv2185c/TB16.3 |
| Rv0924c/mntH | (cc=0.6281) | info on Rv0924c/mntH |
| Rv0642c/mmaA4 | (cc=0.6216) | info on Rv0642c/mmaA4 |
| Rv3166c/- | (cc=0.6028) | info on Rv3166c/- |
| Rv2134c/- | (cc=0.5949) | info on Rv2134c/- |
| Rv0989c/grcC2 | (cc=0.5834) | info on Rv0989c/grcC2 |
| Rv3050c/- | (cc=0.5712) | info on Rv3050c/- |
| Rv2184c/- | (cc=0.5601) | info on Rv2184c/- |
Correlation of Rv0501/galE2 with Rv2134c/-
Normalized LFCs for Rv0501/galE2:
(description and provenance of datasets)
| Rv0501/galE2 | Rv2134c/- | |
| Fe_supp_jason_reseq | 0.819 | 0.297 |
| low_pH_jason_reseq | 0.398 | 1.402 |
| NO_jason_reseq | 0.9 | -0.142 |
| B6_jason_reseq | -0.603 | -0.671 |
| MHCII_jason_reseq | 0.81 | -1.365 |
| Isoniazid02 | -0.566 | 1.529 |
| Rifampicin4 | 0.171 | 0.07 |
| Ethambutol3 | -0.632 | -0.032 |
| Meropenem3 | 0.232 | -0.25 |
| Vancomycin16 | -1.544 | -0.361 |
| Rv2680_day32 | 0.396 | 0.576 |
| H37Rv_KO_MarP | 0.492 | 0.164 |
| hypoxia_3wks | 0.586 | 0.79 |
| hypoxia_6wks | 0.334 | 0.449 |
| glycerol | 1.084 | 1.514 |
| cholesterol | 0.87 | 0.072 |
| AJ | 0.961 | 2.664 |
| Bibs02 | -0.725 | 0.135 |
| Bibs02c | 0.706 | 0.053 |
| BL6 | 0.671 | 1.098 |
| BL6a | 1.462 | 1.845 |
| BXD01 | 1.68 | 1.944 |
| BXD010 | 0.367 | 0.894 |
| BXD011 | 0.832 | 1.787 |
| BXD03 | 0.843 | 2.13 |
| BXD04 | 0.896 | 2.684 |
| BXD05 | 0.688 | 1.601 |
| BXD06 | 1.106 | 1.723 |
| BXD07 | 1.499 | 1.997 |
| BXD08 | 0.999 | 1.765 |
| BXD09 | 1.5 | 1.672 |
| CAST | -0.609 | -0.06 |
| CCcont | 1.284 | 2.265 |
| DS01 | 0.934 | -0.123 |
| DS02 | 0.088 | -0.635 |
| DS04 | 0.749 | 0.738 |
| DS0c | 1.384 | 0.707 |
| GP01 | 1.371 | 1.676 |
| GP02 | 1.485 | 0.119 |
| GP0c | 1.012 | 1.772 |
| NOD | 0.846 | 2.185 |
| NZO | -0.231 | 2.438 |
| PWK | -0.352 | 0.526 |
| H37Rv_KO_CtpC | -0.214 | 0.646 |
| H37Rv_KO_CtpD | 1.254 | 2.104 |
| H37Rv_KO_Rv1272 | 1.287 | 0.767 |
| H37Rv_KO_SugABC | 0.579 | 0.539 |
| H37Rv_KO_MbtN | 1.465 | 2.6 |
| Trans05 | 1.139 | 2.043 |
| macrophage_unactivated | 1.102 | 0.297 |
| IL1 | -0.896 | -1.089 |
| Rapamycin | 0.203 | -0.417 |
| Tcell | 0.661 | 0.052 |
| GMCSF | 0.174 | -0.129 |
| IFNab | 0.278 | 1.376 |
| IFNg | 0.107 | -0.818 |
| IFNg_GMCSF1 | 0.248 | -0.657 |
| Rv1432_day32 | 0.759 | -0.442 |
| Rv1565c_day32 | -0.618 | -0.518 |
| secA2_input | -0.391 | -1.199 |
| delta_Rv3594 | -0.349 | 1.104 |
| delta_Rv3717 | 0.323 | 0.985 |
| delta_Rv3811 | -0.379 | 1.38 |
| delta_Rv0954 | -1.056 | 1.147 |
| PonA1 | -1.075 | -1.337 |
| EccD1_KO | -0.585 | -0.276 |
| EspI_KO | 1.001 | -0.653 |
| PE35_KO | -0.061 | -0.586 |
| PPE68_KO | -0.24 | -0.921 |
| glycerol2 | 0.205 | -0.214 |
| lignocerate | -0.18 | -0.725 |
| oleate | -0.398 | -1.345 |
| phosphatidylcholine | -0.636 | -1.246 |
| acetate | 0.289 | 0.118 |
| glucAc | -0.365 | -0.055 |
| Rv0950ko | -1.004 | 0.0 |
| Rv1096ko | -1.496 | -1.71 |
| Rv3684ko | -1.091 | -2.122 |
| delta_otsA_trehalose | -0.199 | -0.164 |