Top 10 genes with highest correlation to Rv0498/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3560c/fadE30 | (cc=0.4896) | info on Rv3560c/fadE30 |
| Rv3542c/- | (cc=0.4238) | info on Rv3542c/- |
| Rv0724/sppA | (cc=0.3996) | info on Rv0724/sppA |
| Rv1417/- | (cc=0.3967) | info on Rv1417/- |
| Rv0971c/echA7 | (cc=0.3933) | info on Rv0971c/echA7 |
| Rv3705c/- | (cc=0.3913) | info on Rv3705c/- |
| Rv0912/- | (cc=0.3896) | info on Rv0912/- |
| Rv2734/- | (cc=0.385) | info on Rv2734/- |
| Rv3502c/- | (cc=0.3818) | info on Rv3502c/- |
| Rv0096/PPE1 | (cc=0.3807) | info on Rv0096/PPE1 |
Correlation of Rv0498/- with Rv1417/-
Normalized LFCs for Rv0498/-:
(description and provenance of datasets)
| Rv0498/- | Rv1417/- | |
| Fe_supp_jason_reseq | 0.172 | -0.09 |
| low_pH_jason_reseq | -2.11 | 1.039 |
| NO_jason_reseq | 1.055 | 1.817 |
| B6_jason_reseq | -2.047 | -1.53 |
| MHCII_jason_reseq | 0.483 | -0.776 |
| Isoniazid02 | 0.751 | 0.188 |
| Rifampicin4 | 0.839 | -1.465 |
| Ethambutol3 | 0.534 | -0.505 |
| Meropenem3 | 0.869 | -0.231 |
| Vancomycin16 | 0.08 | -0.122 |
| Rv2680_day32 | 0.197 | -2.415 |
| H37Rv_KO_MarP | 0.127 | 0.611 |
| hypoxia_3wks | 0.044 | 0.0 |
| hypoxia_6wks | -0.457 | -0.791 |
| glycerol | 0.944 | 1.685 |
| cholesterol | -0.195 | -0.792 |
| AJ | -0.901 | -1.269 |
| Bibs02 | -0.966 | -0.775 |
| Bibs02c | -1.393 | -1.773 |
| BL6 | 0.856 | 0.577 |
| BL6a | -0.894 | -0.331 |
| BXD01 | -0.114 | 0.783 |
| BXD010 | -0.235 | 0.048 |
| BXD011 | -0.43 | 0.455 |
| BXD03 | -0.201 | -0.356 |
| BXD04 | 0.044 | -0.676 |
| BXD05 | 0.086 | -0.053 |
| BXD06 | 0.071 | 1.042 |
| BXD07 | -0.861 | 1.774 |
| BXD08 | -0.471 | -0.107 |
| BXD09 | 0.503 | -0.113 |
| CAST | -2.334 | -1.415 |
| CCcont | 0.515 | 0.449 |
| DS01 | -0.058 | -1.141 |
| DS02 | 0.373 | -1.843 |
| DS04 | 0.022 | -0.822 |
| DS0c | 0.437 | -1.838 |
| GP01 | 0.823 | 1.054 |
| GP02 | 1.955 | 0.79 |
| GP0c | 0.493 | 2.615 |
| NOD | 0.487 | -1.085 |
| NZO | -0.774 | -1.091 |
| PWK | -1.671 | -0.831 |
| H37Rv_KO_CtpC | 0.019 | -1.116 |
| H37Rv_KO_CtpD | -0.449 | 1.387 |
| H37Rv_KO_Rv1272 | -0.352 | 0.966 |
| H37Rv_KO_SugABC | 1.538 | 2.014 |
| H37Rv_KO_MbtN | -0.29 | -0.127 |
| Trans05 | -0.203 | -0.554 |
| macrophage_unactivated | 0.751 | -0.338 |
| IL1 | -0.163 | 0.0 |
| Rapamycin | 0.586 | 0.307 |
| Tcell | -1.121 | -0.349 |
| GMCSF | 1.154 | 2.709 |
| IFNab | 1.587 | 1.445 |
| IFNg | 0.331 | 0.748 |
| IFNg_GMCSF1 | 0.525 | 2.63 |
| Rv1432_day32 | 0.481 | 0.0 |
| Rv1565c_day32 | -1.072 | -0.766 |
| secA2_input | 0.338 | -1.118 |
| delta_Rv3594 | -0.05 | -0.73 |
| delta_Rv3717 | -0.389 | -2.046 |
| delta_Rv3811 | -1.029 | -2.513 |
| delta_Rv0954 | 0.106 | -0.136 |
| PonA1 | -0.32 | -0.584 |
| EccD1_KO | -0.398 | -0.651 |
| EspI_KO | 0.299 | 0.305 |
| PE35_KO | -0.289 | 1.129 |
| PPE68_KO | -0.729 | -0.912 |
| glycerol2 | -0.157 | -1.77 |
| lignocerate | -0.295 | -0.947 |
| oleate | -1.153 | -1.103 |
| phosphatidylcholine | -0.539 | -0.95 |
| acetate | -0.213 | -0.155 |
| glucAc | 0.016 | -0.389 |
| Rv0950ko | -0.534 | 1.827 |
| Rv1096ko | -0.048 | 0.697 |
| Rv3684ko | -0.946 | 0.102 |
| delta_otsA_trehalose | 0.611 | 0.818 |