Top 10 genes with highest correlation to Rv0498/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3560c/fadE30 | (cc=0.4896) | info on Rv3560c/fadE30 |
| Rv3542c/- | (cc=0.4238) | info on Rv3542c/- |
| Rv0724/sppA | (cc=0.3996) | info on Rv0724/sppA |
| Rv1417/- | (cc=0.3967) | info on Rv1417/- |
| Rv0971c/echA7 | (cc=0.3933) | info on Rv0971c/echA7 |
| Rv3705c/- | (cc=0.3913) | info on Rv3705c/- |
| Rv0912/- | (cc=0.3896) | info on Rv0912/- |
| Rv2734/- | (cc=0.385) | info on Rv2734/- |
| Rv3502c/- | (cc=0.3818) | info on Rv3502c/- |
| Rv0096/PPE1 | (cc=0.3807) | info on Rv0096/PPE1 |
Correlation of Rv0498/- with Rv0096/PPE1
Normalized LFCs for Rv0498/-:
(description and provenance of datasets)
| Rv0498/- | Rv0096/PPE1 | |
| Fe_supp_jason_reseq | 0.172 | 0.527 |
| low_pH_jason_reseq | -2.11 | 0.723 |
| NO_jason_reseq | 1.055 | 0.053 |
| B6_jason_reseq | -2.047 | -1.397 |
| MHCII_jason_reseq | 0.483 | -2.734 |
| Isoniazid02 | 0.751 | -0.16 |
| Rifampicin4 | 0.839 | 0.485 |
| Ethambutol3 | 0.534 | 1.463 |
| Meropenem3 | 0.869 | 0.406 |
| Vancomycin16 | 0.08 | 0.244 |
| Rv2680_day32 | 0.197 | -1.629 |
| H37Rv_KO_MarP | 0.127 | 0.381 |
| hypoxia_3wks | 0.044 | -0.132 |
| hypoxia_6wks | -0.457 | -0.173 |
| glycerol | 0.944 | -0.026 |
| cholesterol | -0.195 | 0.121 |
| AJ | -0.901 | -4.555 |
| Bibs02 | -0.966 | -1.387 |
| Bibs02c | -1.393 | -0.588 |
| BL6 | 0.856 | -0.551 |
| BL6a | -0.894 | -1.106 |
| BXD01 | -0.114 | -0.952 |
| BXD010 | -0.235 | -0.745 |
| BXD011 | -0.43 | -0.949 |
| BXD03 | -0.201 | -0.415 |
| BXD04 | 0.044 | 0.016 |
| BXD05 | 0.086 | -0.487 |
| BXD06 | 0.071 | -1.209 |
| BXD07 | -0.861 | -0.638 |
| BXD08 | -0.471 | -0.072 |
| BXD09 | 0.503 | -0.954 |
| CAST | -2.334 | -3.904 |
| CCcont | 0.515 | 0.17 |
| DS01 | -0.058 | -0.265 |
| DS02 | 0.373 | 2.347 |
| DS04 | 0.022 | -2.202 |
| DS0c | 0.437 | -0.826 |
| GP01 | 0.823 | -0.466 |
| GP02 | 1.955 | -1.531 |
| GP0c | 0.493 | 0.267 |
| NOD | 0.487 | -3.458 |
| NZO | -0.774 | -4.193 |
| PWK | -1.671 | -4.44 |
| H37Rv_KO_CtpC | 0.019 | -1.446 |
| H37Rv_KO_CtpD | -0.449 | 0.3 |
| H37Rv_KO_Rv1272 | -0.352 | -0.593 |
| H37Rv_KO_SugABC | 1.538 | -0.061 |
| H37Rv_KO_MbtN | -0.29 | -0.519 |
| Trans05 | -0.203 | -0.176 |
| macrophage_unactivated | 0.751 | 0.584 |
| IL1 | -0.163 | -1.516 |
| Rapamycin | 0.586 | -1.777 |
| Tcell | -1.121 | -1.453 |
| GMCSF | 1.154 | 1.442 |
| IFNab | 1.587 | 1.675 |
| IFNg | 0.331 | 0.468 |
| IFNg_GMCSF1 | 0.525 | -0.342 |
| Rv1432_day32 | 0.481 | -2.885 |
| Rv1565c_day32 | -1.072 | -3.51 |
| secA2_input | 0.338 | -0.343 |
| delta_Rv3594 | -0.05 | 0.032 |
| delta_Rv3717 | -0.389 | 0.239 |
| delta_Rv3811 | -1.029 | 0.153 |
| delta_Rv0954 | 0.106 | -0.235 |
| PonA1 | -0.32 | -2.947 |
| EccD1_KO | -0.398 | -0.174 |
| EspI_KO | 0.299 | -0.402 |
| PE35_KO | -0.289 | -0.044 |
| PPE68_KO | -0.729 | 0.118 |
| glycerol2 | -0.157 | -5.133 |
| lignocerate | -0.295 | -0.119 |
| oleate | -1.153 | -4.29 |
| phosphatidylcholine | -0.539 | -0.753 |
| acetate | -0.213 | -0.462 |
| glucAc | 0.016 | -0.519 |
| Rv0950ko | -0.534 | -0.338 |
| Rv1096ko | -0.048 | -0.464 |
| Rv3684ko | -0.946 | -0.206 |
| delta_otsA_trehalose | 0.611 | 0.303 |