Top 10 genes with highest correlation to Rv0495c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1471/trxB1 | (cc=0.6096) | info on Rv1471/trxB1 |
| Rv0519c/- | (cc=0.523) | info on Rv0519c/- |
| Rv1526c/- | (cc=0.5196) | info on Rv1526c/- |
| Rv2544/lppB | (cc=0.5136) | info on Rv2544/lppB |
| Rv1051c/- | (cc=0.4858) | info on Rv1051c/- |
| Rv0590A/- | (cc=0.4803) | info on Rv0590A/- |
| Rv1765A/- | (cc=0.4666) | info on Rv1765A/- |
| Rv0698/- | (cc=0.4555) | info on Rv0698/- |
| Rv1167c/- | (cc=0.4474) | info on Rv1167c/- |
| Rv3780/- | (cc=0.4326) | info on Rv3780/- |
Correlation of Rv0495c/- with Rv3780/-
Normalized LFCs for Rv0495c/-:
(description and provenance of datasets)
| Rv0495c/- | Rv3780/- | |
| Fe_supp_jason_reseq | -0.74 | 0.0 |
| low_pH_jason_reseq | -0.137 | 0.0 |
| NO_jason_reseq | 1.037 | 0.0 |
| B6_jason_reseq | -2.051 | 0.0 |
| MHCII_jason_reseq | -1.332 | 0.0 |
| Isoniazid02 | 1.336 | -0.383 |
| Rifampicin4 | -1.974 | -0.341 |
| Ethambutol3 | -0.711 | -0.153 |
| Meropenem3 | -0.701 | -0.315 |
| Vancomycin16 | -1.738 | -0.698 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 0.841 | 1.936 |
| hypoxia_3wks | -1.328 | -1.049 |
| hypoxia_6wks | 0.171 | -0.549 |
| glycerol | 2.951 | -0.202 |
| cholesterol | -0.614 | 0.659 |
| AJ | -0.983 | -0.232 |
| Bibs02 | 0.256 | -0.183 |
| Bibs02c | -1.049 | 0.527 |
| BL6 | 1.35 | 0.569 |
| BL6a | 0.936 | 0.346 |
| BXD01 | 0.44 | 0.0 |
| BXD010 | 1.214 | 0.0 |
| BXD011 | 1.258 | 0.727 |
| BXD03 | 0.066 | -0.135 |
| BXD04 | 0.623 | 0.0 |
| BXD05 | 0.871 | 0.0 |
| BXD06 | 0.672 | 0.0 |
| BXD07 | 0.82 | 0.0 |
| BXD08 | 0.243 | 0.521 |
| BXD09 | 1.303 | 0.128 |
| CAST | -0.117 | -0.23 |
| CCcont | 2.323 | 1.934 |
| DS01 | 0.0 | -0.236 |
| DS02 | -1.271 | -0.217 |
| DS04 | 0.184 | 0.0 |
| DS0c | 0.484 | 1.354 |
| GP01 | -0.667 | 0.0 |
| GP02 | -0.645 | -0.083 |
| GP0c | -0.066 | 0.0 |
| NOD | -0.361 | -0.225 |
| NZO | -1.348 | -0.199 |
| PWK | 1.269 | 0.342 |
| H37Rv_KO_CtpC | 1.051 | 1.759 |
| H37Rv_KO_CtpD | 0.381 | 0.221 |
| H37Rv_KO_Rv1272 | 2.828 | 0.553 |
| H37Rv_KO_SugABC | -0.579 | 0.0 |
| H37Rv_KO_MbtN | -0.166 | 0.18 |
| Trans05 | -0.655 | 0.0 |
| macrophage_unactivated | -1.016 | 0.83 |
| IL1 | 0.0 | 0.0 |
| Rapamycin | 0.641 | 0.0 |
| Tcell | -0.671 | 0.0 |
| GMCSF | -0.449 | 0.0 |
| IFNab | 0.281 | 0.0 |
| IFNg | 0.484 | 0.369 |
| IFNg_GMCSF1 | -0.101 | 0.0 |
| Rv1432_day32 | 0.0 | 0.052 |
| Rv1565c_day32 | -0.096 | 0.0 |
| secA2_input | -2.246 | -0.568 |
| delta_Rv3594 | 0.753 | 0.281 |
| delta_Rv3717 | -0.087 | 0.232 |
| delta_Rv3811 | -0.068 | -0.315 |
| delta_Rv0954 | 0.393 | -0.981 |
| PonA1 | 0.71 | -0.53 |
| EccD1_KO | -0.079 | -0.921 |
| EspI_KO | -0.987 | -0.799 |
| PE35_KO | -0.753 | -0.254 |
| PPE68_KO | -0.736 | 1.59 |
| glycerol2 | -0.228 | 1.684 |
| lignocerate | 0.442 | 2.097 |
| oleate | -1.569 | 0.0 |
| phosphatidylcholine | -0.073 | 1.499 |
| acetate | 2.956 | 3.004 |
| glucAc | 3.04 | 2.859 |
| Rv0950ko | -1.306 | 0.621 |
| Rv1096ko | 0.67 | 0.323 |
| Rv3684ko | -1.3 | -0.377 |
| delta_otsA_trehalose | -0.443 | -3.775 |