Top 10 genes with highest correlation to Rv0484c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0071/- | (cc=0.5045) | info on Rv0071/- |
| Rv0139/- | (cc=0.4782) | info on Rv0139/- |
| Rv3788/- | (cc=0.4679) | info on Rv3788/- |
| Rv2902c/rnhB | (cc=0.443) | info on Rv2902c/rnhB |
| Rv3729/- | (cc=0.4328) | info on Rv3729/- |
| Rv3450c/eccB4 | (cc=0.4292) | info on Rv3450c/eccB4 |
| Rv2651c/- | (cc=0.4255) | info on Rv2651c/- |
| Rv0536/galE3 | (cc=0.4201) | info on Rv0536/galE3 |
| Rv2725c/hflX | (cc=0.4146) | info on Rv2725c/hflX |
| Rv0918/- | (cc=0.4132) | info on Rv0918/- |
Correlation of Rv0484c/- with Rv3729/-
Normalized LFCs for Rv0484c/-:
(description and provenance of datasets)
| Rv0484c/- | Rv3729/- | |
| Fe_supp_jason_reseq | 0.502 | 0.191 |
| low_pH_jason_reseq | -0.336 | -0.248 |
| NO_jason_reseq | -0.016 | -0.52 |
| B6_jason_reseq | -1.062 | 0.243 |
| MHCII_jason_reseq | 0.183 | 0.015 |
| Isoniazid02 | -0.128 | 0.345 |
| Rifampicin4 | -0.547 | -0.019 |
| Ethambutol3 | 1.402 | 1.465 |
| Meropenem3 | 1.519 | 0.095 |
| Vancomycin16 | -0.621 | 0.159 |
| Rv2680_day32 | 1.364 | 0.712 |
| H37Rv_KO_MarP | -0.26 | 0.303 |
| hypoxia_3wks | 0.032 | 0.036 |
| hypoxia_6wks | 0.167 | 0.035 |
| glycerol | 1.142 | 0.351 |
| cholesterol | 0.334 | 0.968 |
| AJ | 0.634 | 0.615 |
| Bibs02 | 0.441 | -0.4 |
| Bibs02c | 0.437 | -0.099 |
| BL6 | 0.011 | -0.716 |
| BL6a | -0.227 | -0.209 |
| BXD01 | -0.203 | -0.803 |
| BXD010 | -0.29 | -0.28 |
| BXD011 | -1.05 | -0.292 |
| BXD03 | -0.801 | -0.643 |
| BXD04 | -0.558 | -0.588 |
| BXD05 | -0.665 | -0.366 |
| BXD06 | -0.42 | -0.238 |
| BXD07 | -0.625 | -0.206 |
| BXD08 | -1.069 | -0.597 |
| BXD09 | -0.494 | -0.51 |
| CAST | -0.669 | 0.01 |
| CCcont | -0.861 | -0.671 |
| DS01 | -0.132 | 0.039 |
| DS02 | -0.373 | -0.221 |
| DS04 | 0.59 | 0.103 |
| DS0c | 0.515 | 0.547 |
| GP01 | -1.6 | 0.021 |
| GP02 | 0.192 | 0.204 |
| GP0c | -0.533 | 0.387 |
| NOD | 0.185 | 0.405 |
| NZO | -0.009 | 0.774 |
| PWK | 1.444 | 0.52 |
| H37Rv_KO_CtpC | -0.122 | -0.106 |
| H37Rv_KO_CtpD | 0.554 | 0.995 |
| H37Rv_KO_Rv1272 | -0.847 | 0.012 |
| H37Rv_KO_SugABC | -1.378 | 0.227 |
| H37Rv_KO_MbtN | -0.87 | -0.252 |
| Trans05 | -0.371 | -0.062 |
| macrophage_unactivated | 0.085 | -0.742 |
| IL1 | -0.166 | -0.178 |
| Rapamycin | 0.11 | -0.264 |
| Tcell | 0.0 | -0.456 |
| GMCSF | 0.663 | -0.135 |
| IFNab | -0.139 | 0.024 |
| IFNg | 0.417 | -0.206 |
| IFNg_GMCSF1 | 0.383 | 0.129 |
| Rv1432_day32 | 0.21 | 0.111 |
| Rv1565c_day32 | 0.486 | -0.194 |
| secA2_input | 1.321 | 0.117 |
| delta_Rv3594 | 0.115 | -0.102 |
| delta_Rv3717 | -0.213 | -0.152 |
| delta_Rv3811 | 0.46 | 0.064 |
| delta_Rv0954 | 0.165 | 0.411 |
| PonA1 | -0.163 | 0.367 |
| EccD1_KO | 0.039 | 0.253 |
| EspI_KO | -0.491 | -0.066 |
| PE35_KO | -0.05 | -0.166 |
| PPE68_KO | -0.72 | -0.202 |
| glycerol2 | -0.136 | 0.581 |
| lignocerate | 0.429 | 0.934 |
| oleate | -0.068 | -0.172 |
| phosphatidylcholine | 0.143 | 0.301 |
| acetate | 0.188 | 0.71 |
| glucAc | -0.037 | 0.667 |
| Rv0950ko | -0.926 | -0.181 |
| Rv1096ko | -0.142 | -0.392 |
| Rv3684ko | 0.57 | -0.426 |
| delta_otsA_trehalose | -0.313 | -0.334 |