Top 10 genes with highest correlation to Rv0484c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0071/- | (cc=0.5045) | info on Rv0071/- |
| Rv0139/- | (cc=0.4782) | info on Rv0139/- |
| Rv3788/- | (cc=0.4679) | info on Rv3788/- |
| Rv2902c/rnhB | (cc=0.443) | info on Rv2902c/rnhB |
| Rv3729/- | (cc=0.4328) | info on Rv3729/- |
| Rv3450c/eccB4 | (cc=0.4292) | info on Rv3450c/eccB4 |
| Rv2651c/- | (cc=0.4255) | info on Rv2651c/- |
| Rv0536/galE3 | (cc=0.4201) | info on Rv0536/galE3 |
| Rv2725c/hflX | (cc=0.4146) | info on Rv2725c/hflX |
| Rv0918/- | (cc=0.4132) | info on Rv0918/- |
Correlation of Rv0484c/- with Rv0071/-
Normalized LFCs for Rv0484c/-:
(description and provenance of datasets)
| Rv0484c/- | Rv0071/- | |
| Fe_supp_jason_reseq | 0.502 | 0.624 |
| low_pH_jason_reseq | -0.336 | -0.139 |
| NO_jason_reseq | -0.016 | 0.517 |
| B6_jason_reseq | -1.062 | 1.764 |
| MHCII_jason_reseq | 0.183 | 1.675 |
| Isoniazid02 | -0.128 | 0.073 |
| Rifampicin4 | -0.547 | 0.75 |
| Ethambutol3 | 1.402 | 1.131 |
| Meropenem3 | 1.519 | 0.694 |
| Vancomycin16 | -0.621 | 0.218 |
| Rv2680_day32 | 1.364 | 1.537 |
| H37Rv_KO_MarP | -0.26 | 0.059 |
| hypoxia_3wks | 0.032 | -0.152 |
| hypoxia_6wks | 0.167 | -0.182 |
| glycerol | 1.142 | 1.16 |
| cholesterol | 0.334 | 1.207 |
| AJ | 0.634 | -0.504 |
| Bibs02 | 0.441 | 0.474 |
| Bibs02c | 0.437 | 0.887 |
| BL6 | 0.011 | 0.441 |
| BL6a | -0.227 | -0.265 |
| BXD01 | -0.203 | -0.919 |
| BXD010 | -0.29 | -0.781 |
| BXD011 | -1.05 | -0.745 |
| BXD03 | -0.801 | -1.044 |
| BXD04 | -0.558 | -0.664 |
| BXD05 | -0.665 | -0.091 |
| BXD06 | -0.42 | -0.636 |
| BXD07 | -0.625 | -0.722 |
| BXD08 | -1.069 | -0.8 |
| BXD09 | -0.494 | -0.69 |
| CAST | -0.669 | 0.235 |
| CCcont | -0.861 | -0.342 |
| DS01 | -0.132 | 0.301 |
| DS02 | -0.373 | 0.767 |
| DS04 | 0.59 | 0.51 |
| DS0c | 0.515 | -0.093 |
| GP01 | -1.6 | -2.601 |
| GP02 | 0.192 | -2.703 |
| GP0c | -0.533 | -1.661 |
| NOD | 0.185 | 1.694 |
| NZO | -0.009 | 0.027 |
| PWK | 1.444 | 0.443 |
| H37Rv_KO_CtpC | -0.122 | 0.0 |
| H37Rv_KO_CtpD | 0.554 | 0.247 |
| H37Rv_KO_Rv1272 | -0.847 | -0.757 |
| H37Rv_KO_SugABC | -1.378 | -0.655 |
| H37Rv_KO_MbtN | -0.87 | -0.546 |
| Trans05 | -0.371 | -0.911 |
| macrophage_unactivated | 0.085 | 0.085 |
| IL1 | -0.166 | 0.181 |
| Rapamycin | 0.11 | 0.779 |
| Tcell | 0.0 | -0.088 |
| GMCSF | 0.663 | 0.671 |
| IFNab | -0.139 | -0.366 |
| IFNg | 0.417 | -0.171 |
| IFNg_GMCSF1 | 0.383 | 0.776 |
| Rv1432_day32 | 0.21 | 0.426 |
| Rv1565c_day32 | 0.486 | 1.978 |
| secA2_input | 1.321 | 1.85 |
| delta_Rv3594 | 0.115 | -0.136 |
| delta_Rv3717 | -0.213 | -0.409 |
| delta_Rv3811 | 0.46 | -0.201 |
| delta_Rv0954 | 0.165 | 0.828 |
| PonA1 | -0.163 | 0.177 |
| EccD1_KO | 0.039 | -1.727 |
| EspI_KO | -0.491 | -1.931 |
| PE35_KO | -0.05 | -1.248 |
| PPE68_KO | -0.72 | -1.017 |
| glycerol2 | -0.136 | 0.422 |
| lignocerate | 0.429 | 0.559 |
| oleate | -0.068 | -0.903 |
| phosphatidylcholine | 0.143 | 0.172 |
| acetate | 0.188 | 0.321 |
| glucAc | -0.037 | 0.587 |
| Rv0950ko | -0.926 | 0.066 |
| Rv1096ko | -0.142 | 0.709 |
| Rv3684ko | 0.57 | -0.072 |
| delta_otsA_trehalose | -0.313 | 1.156 |